PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV53795.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family G2-like
Protein Properties Length: 367aa    MW: 40030.5 Da    PI: 8.5788
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV53795.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.23.3e-32240293255
     G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  KZV53795.1 240 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 293
                 9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.97E-15237293IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.4E-28238293IPR009057Homeodomain-like
TIGRFAMsTIGR015578.5E-24240293IPR006447Myb domain, plants
PfamPF002496.2E-7241292IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009887Biological Processorgan morphogenesis
GO:0009944Biological Processpolarity specification of adaxial/abaxial axis
GO:0009956Biological Processradial pattern formation
GO:0010051Biological Processxylem and phloem pattern formation
GO:0010158Biological Processabaxial cell fate specification
GO:0010229Biological Processinflorescence development
GO:0048481Biological Processplant ovule development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MPLEGIFVEA SSKQAPDLSL HISPPNTNSS GSEVVSSFDL VSNKNPKNCS SSFIELSLAH  60
PSNHEIIRPV QKNFFTSEAT SHQEQPQNPY HHLSYHQSNP QGIPVYPNRP FPFLPMDNLT  120
REKDPKMYYY QMPYPSWSSS SSSSSCSSFC SSPSSISHHP CSPYLGGGLN HTHMPMLNPG  180
PNASFPAGGY RIPGGGSARF SGLAASYQYG LGSSHDASHN GILRSRFLPK LPAKRSMRAP  240
RMRWTSTLHA RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVKTTDKP  300
AASSGHSDGS GEDDLSTIGN GAGSSDRGRF IDQRGGSDGS LQQDVDYPST AGTLWSNSSR  360
YVVNMFF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A6e-17241295458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B6e-17241295458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A6e-17241295357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B6e-17241295357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C6e-17241295357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D6e-17241295357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A6e-17241295458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C6e-17241295458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D6e-17241295458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F6e-17241295458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H6e-17241295458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J6e-17241295458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV53795.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022853842.11e-143transcription repressor KAN1-like isoform X3
TrEMBLA0A2G9GLA31e-136A0A2G9GLA3_9LAMI; Uncharacterized protein
STRINGcassava4.1_008805m1e-113(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24682355
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16560.13e-52G2-like family protein