PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV54049.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family G2-like
Protein Properties Length: 732aa    MW: 82412.5 Da    PI: 9.0386
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV54049.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like301.1e-09113140128
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAt 28 
                 k+r+rWt++LH +F+  v +LGG+++At
  KZV54049.1 113 KKRIRWTEDLHMKFIMSVGSLGGAKRAT 140
                 68*************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.2E-6111168IPR009057Homeodomain-like
SuperFamilySSF517356.71E-57256536IPR016040NAD(P)-binding domain
Gene3DG3DSA:3.40.50.7207.6E-45261612IPR016040NAD(P)-binding domain
PfamPF010733.6E-84262540IPR0022253-beta hydroxysteroid dehydrogenase/isomerase
SuperFamilySSF517356.71E-57584622IPR016040NAD(P)-binding domain
PfamPF149341.0E-10636706IPR028110Transmembrane protein 254
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006694Biological Processsteroid biosynthetic process
GO:0055114Biological Processoxidation-reduction process
GO:0005783Cellular Componentendoplasmic reticulum
GO:0003677Molecular FunctionDNA binding
GO:0003854Molecular Function3-beta-hydroxy-delta5-steroid dehydrogenase activity
Sequence ? help Back to Top
Protein Sequence    Length: 732 aa     Download sequence    Send to blast
MLAAPYPETP PFNNPSKNEH YFRSKDTLQS LVQSCLCSKQ CQSSQQKSIK SCNSADVLEC  60
KNQKLRPDRT ISKSSPSFGF DNINLSLEKQ STLSFSGTTL IARKIVASEK ENKKRIRWTE  120
DLHMKFIMSV GSLGGAKRAT EQHDTKISCS SSNDRMLDLN TDMKQSHTYL FHEINGEGYA  180
ILVAASNLKR REVFSMNGYL GKNKTLYGLL VDILSLMMIK CIITGVGLEY DSMVVHLIGN  240
HRRLSLKMHL SENEGIENRT FVVTGGLGFV GSALCFELVR RGARQVRAFD IRPESPWAND  300
LLHRGVHCIQ GDISQKKDVE KALHGANCVF HLASYGMSGK EMLRFGRVDE ININGTCHIL  360
DACLEYGINR LVYVSTYNVV FGGKEIVNGN EVLPYFPIDD HIDPYGRSKS IAEQLVLKNN  420
GRPFKNKRGK FYTCAIRPAA IYGPGEERHF PRIVGLAKLG LLPFKIGPTN VKTDWVYIDN  480
LVLALLLASM GLLDDIPGRE GCPIASGQPY FISDGRPVNS FEFIRPLLKS LDYELPKLSL  540
AVPQALFLGN FFWGFYTVLY PWLDQKWLPQ PLILPAEVYK VGVTHYFSFL KAKEELGYIP  600
MVSPEEGMAA TITYWKERKR RTLDGPPIYE WLLVDTGMIV LFCAAYMPDC PPFSQLRAFC  660
LFFIPSVGAL RVIFLLAAAA HITQAFYAWR LAKKVDPENV RGVRYLKLRN ISFGGQRQKL  720
AMDYEPFDSS GV
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV54049.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022879020.10.0short-chain dehydrogenase/reductase family 42E member 1 isoform X1
RefseqXP_022879021.10.0short-chain dehydrogenase/reductase family 42E member 1 isoform X1
TrEMBLA0A2Z7D6A40.0A0A2Z7D6A4_9LAMI; Uncharacterized protein
STRINGEMJ111630.0(Prunus persica)