PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV54110.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

TCP

Protein Properties

Length: 201aa MW: 22389.2 Da PI: 6.1515

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV54110.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	80.5	4.3e-25	43	111	7	75
TCP 7 rhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasecea 75 +++ k + RR+R++a+caar+F+L++eLG+ ++++tieW l+qa+p+i ++tg+++++a+ a KZV54110.1 43 PTKNLNKKSDNHYRRMRIPALCAARIFQLTRELGHHTNGETIEWILRQAEPSINAITGSGTIPAETICA 111 5677777899999**********************************************9999843322 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51369	15.395	44	98	IPR017887	Transcription factor TCP subgroup
Pfam	PF03634	1.1E-20	56	115	IPR005333	Transcription factor, TCP

Sequence ? help Back to Top
Protein Sequence Length: 201 aa Download sequence Send to blast
MSSFDKLHSP PPSENNHSSS LIATPQNTDT SASKRKDNSR MNPTKNLNKK SDNHYRRMRI 60 PALCAARIFQ LTRELGHHTN GETIEWILRQ AEPSINAITG SGTIPAETIC ASSGILPPVS 120 ESSTILAPET SLVAHSLEST RAMDMRMVTP RSGFELNSPP SLTQMEVPMS GNLHVPFTQM 180 MQQPDADMEE WDEIWFKENF P

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV54110.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2Z7D4Q1	1e-147	A0A2Z7D4Q1_9LAMI; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA248	24	201

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72010.1	8e-26	TCP family protein