PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV55197.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family G2-like
Protein Properties Length: 426aa    MW: 47038.1 Da    PI: 6.6173
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV55197.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like68.31.3e-21220264145
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtleh 45 
                 k+r++W+p+LH+rFv+a++ LGGs+ AtPk+i+elmkv+gLt+++
  KZV55197.1 220 KARRCWSPDLHRRFVNALQMLGGSQLATPKQIRELMKVDGLTNDE 264
                 68****************************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.4E-17217271IPR009057Homeodomain-like
SuperFamilySSF466892.15E-8218271IPR009057Homeodomain-like
TIGRFAMsTIGR015571.8E-16220264IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009266Biological Processresponse to temperature stimulus
GO:0009740Biological Processgibberellic acid mediated signaling pathway
GO:0010452Biological Processhistone H3-K36 methylation
GO:0048579Biological Processnegative regulation of long-day photoperiodism, flowering
GO:1903507Biological Processnegative regulation of nucleic acid-templated transcription
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    Send to blast
MLHAAPEMMT PSSELSFDCK PYVQPTQKLE EFLARLEEER LKIDAFKREL PLCMQLLNNA  60
MEASRQQLQS QQSLNEGGRP VLEEFIPLRN TSSEITTDQN NNSTDKANWM TSAQLWNQES  120
ETRTPSPKEN NDHIKIALSG KQRVINGGAF VPFTSKERTF TPFPELALAS SVSQKEEMEL  180
EATKNSWESN SRRENSNNIS GSEKEQVHGA ANTTSQAQRK ARRCWSPDLH RRFVNALQML  240
GGSQLATPKQ IRELMKVDGL TNDEKYRLHT RRPSPNSQST PATPQVVVLG GIWVPPEYAA  300
AAAAAHGGAQ ATALYGQHTN TAHHVSPVFC SAPPHVAHEM YPAIAAPPQQ SNRHMHHHQL  360
HVYNKPGNSS PDSDAQGGAG DQSESIEDGK SESGSWKADS AGENGGERKR QDGEESNASV  420
IMSLKF
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor acting as a flowering repressor, directly repressing FT expression in a dosage-dependent manner in the leaf vasculature. {ECO:0000269|PubMed:25132385}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00261DAPTransfer from AT2G03500Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV55197.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by SVP. Down-regulated by high temperature and gibberellic acid treatment. Not regulated by photoperiod, circadian rhythm under long days or vernalization. {ECO:0000269|PubMed:25132385}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022895932.11e-136myb family transcription factor EFM-like
SwissprotQ9ZQ853e-89EFM_ARATH; Myb family transcription factor EFM
TrEMBLA0A2Z7D8600.0A0A2Z7D860_9LAMI; Myb family transcription factor family protein
STRINGXP_002529346.11e-134(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA87942229
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.12e-74G2-like family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]