PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV55605.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family G2-like
Protein Properties Length: 248aa    MW: 28236.2 Da    PI: 9.3384
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV55605.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like81.68.8e-26191241151
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                 k+r+ W peLH++Fv+a+++LGG e A Pk+i+e+m+v+gLt++++kSHLQ
  KZV55605.1 191 KQRRSWCPELHNQFVDALQHLGGVEAAKPKQIREVMNVNGLTNDEIKSHLQ 241
                 79************************************************* PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.0E-22188241IPR009057Homeodomain-like
SuperFamilySSF466895.55E-12189242IPR009057Homeodomain-like
TIGRFAMsTIGR015577.2E-21191242IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    Send to blast
MTETYKEERE KLESIYVPKT IAQILTDVST IDGFSRKLMI LEFHVQAIEE ELRRTSASKH  60
PRYYSFHFLK DAIEILKQEI LMWKRREKKP VVQQLMPVEN GCGGCSGTKE SADINDKREW  120
MSSVRLWTIP VHHKSSHGGY QAGSSGGDFN HKVEGATMKN KGVDPVSSST AESEVAPIDL  180
NVKRKDPQRK KQRRSWCPEL HNQFVDALQH LGGVEAAKPK QIREVMNVNG LTNDEIKSHL  240
QVSKNIIT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1187193QRKKQRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV55605.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z7DAG80.0A0A2Z7DAG8_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA84972229
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13300.13e-17G2-like family protein