PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV56030.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 231aa    MW: 25811 Da    PI: 4.5543
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV56030.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.31.8e-051742081554
                 HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 r+++    Lr+++P a     k++s +++L +Av+Y++sL
  KZV56030.1 174 RMRTMVKVLRSMVPGA-----KRMSTVTVLDEAVQYLQSL 208
                 67777788******99.....89***************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.559159208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.1E-4170214IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.6E-6173216IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.09E-7173213No hitNo description
SuperFamilySSF474592.62E-8173217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MFPALNYFMQ NTEMFPVLNN RRVPVPYDIE PFGPFHGVDI QSSEACPRNF VIFDQSNAGS  60
HIIFHPEIRS KFFDFCLADS ESILKGEDDR KNTKCEGDFF SLLNEDSDDI DALLSMEDVE  120
NEGYEDDEVS TARTDAIFEC NSPGSCSNYE SAPRKCSVLG ASSMIGCNYK KGERMRTMVK  180
VLRSMVPGAK RMSTVTVLDE AVQYLQSLKA QVHNLEVLGA DSPTKSAARK V
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV56030.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011085262.15e-61transcription factor bHLH144
RefseqXP_011085263.15e-61transcription factor bHLH144
RefseqXP_011085264.15e-61transcription factor bHLH144
TrEMBLA0A2Z7D8S31e-172A0A2Z7D8S3_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA81241924
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29950.23e-24bHLH family protein