PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV56940.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 253aa    MW: 28081.9 Da    PI: 5.4007
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV56940.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.48e-11137184455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  KZV56940.1 137 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 184
                 8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.19E-10131188No hitNo description
SuperFamilySSF474598.64E-18131200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.7E-18133201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.828133183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.5E-8137184IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-10139189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MDPQEGMMGG GGVYYSEIWP GFQMNANAGP YNVDPMVVDH GSNHAPPASH NSRKRREEEE  60
CARGGASTSN CYDNDNDVSY EGESKRLKAE GLNDDNENKV DTDGNSGKAL DQPPKPAEQP  120
KQDYIHVRAR RGQATDSHSL AERARREKIS ERMKILQDLV PGCNKVIGKA LVLDEIINYI  180
QSLQHQVEFL SMKLEAVNSR VGLDGYPSKD FNQQTFDAPG MTYGSQGARE YGGRSLSPEW  240
LHMQTGGRFE RTS
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV56940.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011071046.11e-120transcription factor bHLH79-like
SwissprotQ69WS34e-72BH094_ORYSJ; Transcription factor BHLH094
TrEMBLA0A2Z7DB630.0A0A2Z7DB63_9LAMI; Uncharacterized protein
STRINGMigut.L01368.1.p1e-114(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12872471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.12e-72BIG PETAL P