PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV57182.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 76aa    MW: 8479.85 Da    PI: 11.7941
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV57182.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.31.5e-093865330
                HHHHHHHHHHHHHHHHHHHHHHCTSCCC CS
         HLH  3 rahnerErrRRdriNsafeeLrellPka 30
                ++h+e+ErrRR+riN  f++Lr l+ ++
  KZV57182.1 38 KSHSEAERRRRERINAHFATLRGLISSN 65
                68**********************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.56E-82966IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.3213576IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.0E-73865IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.2E-83965IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 76 aa     Download sequence    Send to blast
MSKVSVKQLL VLDGEKGELV KTSRGNGVRD AKTLAALKSH SEAERRRRER INAHFATLRG  60
LISSNEKVRN LILGLR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14348ERRRRE
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV57182.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012830318.14e-19PREDICTED: transcription factor bHLH30-like
TrEMBLA0A2Z7DC177e-45A0A2Z7DC17_9LAMI; DNA binding protein
STRINGMigut.H01448.1.p1e-18(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA67302230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25710.12e-07basic helix-loop-helix 32