PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV57495.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

LBD

Protein Properties

Length: 129aa MW: 14319.8 Da PI: 4.1724

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV57495.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	22.8	2.6e-07	2	32	70	100
DUF260 70 rdPvyGavgvilklqqqleqlkaelallkee 100 +dP+yG+v++i++lqqq+++ k+e+++++++ KZV57495.1 2 HDPIYGCVSHIFALQQQVASIKEEIEMVGNQ 32 7*************************99987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03195	1.8E-4	2	29	IPR004883	Lateral organ boundaries, LOB

Sequence ? help Back to Top
Protein Sequence Length: 129 aa Download sequence Send to blast
MHDPIYGCVS HIFALQQQVA SIKEEIEMVG NQMANLGFDM AGITLPRQTD HPYLGCESID 60 DHGVSLHSFP ISNSGHEFMD QAVCFSHVGT GTENDSAHAY FNSSILESLL EELNQDYYMA 120 EEFSAMNGR

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV57495.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2Z7DIA0	2e-91	A0A2Z7DIA0_9LAMI; LOB domain-containing protein 33

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06080.1	5e-13	LOB domain-containing protein 33