PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV57527.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family DBB
Protein Properties Length: 199aa    MW: 22277.1 Da    PI: 5.332
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV57527.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box24.17.4e-08433534
    zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeH 34
                 C+ +e+  ++lfC  ++  lC+ C +e H
  KZV57527.1  4 LCDVCESAAAILFCSADEAALCRACDDEVH 33
                7***************************99 PP
2zf-B_box29.81.3e-095292238
    zf-B_box  2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....Ht 38
                e ++C+ +e+ ++ ++Ce +++ lC +C +  H g    H+
  KZV57527.1 52 EVPRCDICESAPAFFYCEVDGSSLCLQCDMIVHVGgkrtHE 92
                789***************************99966666776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003361.5E-7147IPR000315B-box-type zinc finger
PROSITE profilePS5011910.168147IPR000315B-box-type zinc finger
CDDcd000211.37E-6345No hitNo description
PfamPF006434.2E-6341IPR000315B-box-type zinc finger
SMARTSM003363.1E-105196IPR000315B-box-type zinc finger
PROSITE profilePS501199.3995196IPR000315B-box-type zinc finger
PfamPF006431.8E-75292IPR000315B-box-type zinc finger
CDDcd000215.86E-75493No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010100Biological Processnegative regulation of photomorphogenesis
GO:0070370Biological Processcellular heat acclimation
GO:0071483Biological Processcellular response to blue light
GO:0005634Cellular Componentnucleus
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MRTLCDVCES AAAILFCSAD EAALCRACDD EVHMCNKLAS RHVRVGLAEP SEVPRCDICE  60
SAPAFFYCEV DGSSLCLQCD MIVHVGGKRT HERYLLLRQR AEFPGDKPEN LDEPGSVRGN  120
LVQAKKEPSH VSPNPMIVNN IECNGKMENK FIDLNTRPQR VHGRASTNQE QVNNLFNNHH  180
EPENIVDGSF KREPENNEV
Functional Description ? help Back to Top
Source Description
UniProtActs as negative regulator of seedling photomorphogenesis. {ECO:0000269|PubMed:18540109}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV57527.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011088488.11e-103B-box zinc finger protein 19
RefseqXP_020551620.11e-103B-box zinc finger protein 19
RefseqXP_020551621.11e-103B-box zinc finger protein 19
RefseqXP_020551622.11e-103B-box zinc finger protein 19
SwissprotC0SVM51e-77BBX19_ARATH; B-box zinc finger protein 19
TrEMBLA0A2Z7DEG31e-145A0A2Z7DEG3_9LAMI; B-box type zinc finger family protein
STRINGMigut.B00176.1.p2e-99(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31752340
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38960.14e-80DBB family protein