PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV57567.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 213aa    MW: 23884.2 Da    PI: 11.3744
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV57567.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.52.9e-171968255
         AP2  2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr ++ +gr+ AeI d +     r  r +lg++ taeeAa+a+++a+++++g
  KZV57567.1 19 RYRGVRKRP-WGRYGAEITDpW-----RkCRLWLGTYNTAEEAARAYDNAARRFRG 68
                69*******.**********88.....44************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.8E-281977IPR001471AP2/ERF domain
SMARTSM003805.6E-311982IPR001471AP2/ERF domain
CDDcd000184.26E-281976No hitNo description
PfamPF008472.9E-111968IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-201976IPR016177DNA-binding domain
PROSITE profilePS5103222.511976IPR001471AP2/ERF domain
PRINTSPR003672.4E-102031IPR001471AP2/ERF domain
PRINTSPR003672.4E-104258IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    Send to blast
MAPLRADKNA TNECGHGVRY RGVRKRPWGR YGAEITDPWR KCRLWLGTYN TAEEAARAYD  60
NAARRFRGWR ARTNFPSPQP MVVNTNHLIN YGTAASQTST VESSTDRKAS PAPLGKSVDP  120
GLTLPSLHPF LVQDGYIKLL PAAAAFAGLN IDPVQTSLLK LGPESQKKIA DLMNAVHHVP  180
VSYPFRLSAR KKRDWIFLRR HRRGSGRTHS SRQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-171776363ATERF1
3gcc_A3e-171776363ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV57567.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022976583.18e-34ethylene-responsive transcription factor 4-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.12e-21ERF domain protein 12