PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV57579.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

Dof

Protein Properties

Length: 268aa MW: 29737.3 Da PI: 8.2577

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV57579.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	110.1	1.1e-34	42	99	3	60
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 + lkcprC stntkfCyynny+ sqPryfCkaC+r+Wt+GG+lrnvPvGggr+ ++ KZV57579.1 42 PEFLKCPRCGSTNTKFCYYNNYNKSQPRYFCKACKRHWTRGGTLRNVPVGGGRKSKRP 99 6789************************************************887765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	6.0E-22	41	98	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	27.149	45	99	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.1E-30	45	97	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	47	83	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence Send to blast
MGWSIKQEVS VNGGADWSHI LLQPGAAAEL EKPPSMRRQQ QPEFLKCPRC GSTNTKFCYY 60 NNYNKSQPRY FCKACKRHWT RGGTLRNVPV GGGRKSKRPK RSTSATPISS STTAAATPRH 120 HDCPDFPFAT TINLDQKIMH STTLCHDLSR SSSPMLRDIP KYSMVNENGA NNTANSTASA 180 SQIETTECPF SSLGMFDTNS CFNVYQGYTW NLDSAAESTI TPVNIPAISS VPQWQTVESC 240 SGTMDLANDW NWNGIDELVS PDQFKYII

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV57579.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011096259.1	3e-65	dof zinc finger protein DOF1.4-like
TrEMBL	A0A2G9HFL0	3e-64	A0A2G9HFL0_9LAMI; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA6171	20	33

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52440.1	1e-28	Dof family protein