PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV57661.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family WRKY
Protein Properties Length: 322aa    MW: 35267.1 Da    PI: 6.9887
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV57661.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.32.1e-30147205259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs++pr+YY+C++  gC+++k+ver+++dp ++++tY+ eHnh+
  KZV57661.1 147 SDMWSWRKYGQKPIKGSPYPRGYYKCSTLkGCMARKQVERNKSDPGMFIVTYTAEHNHP 205
                 79************************9988****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.3E-31139207IPR003657WRKY domain
PROSITE profilePS5081133.809141207IPR003657WRKY domain
SuperFamilySSF1182901.57E-26143207IPR003657WRKY domain
SMARTSM007747.0E-36146206IPR003657WRKY domain
PfamPF031061.8E-25148205IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010150Biological Processleaf senescence
GO:0010200Biological Processresponse to chitin
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MEDDWDIQAV VRGCSTAAAA AVAIAKASCG QVFCTSHQNH SFCSTGIQPL FEPRKENSVH  60
ELQDLYKPFS PQTVFAQNSS TVSPLFLLGG LQDQSAEQQQ SLQVVSQKQQ LFSLPSVSKP  120
NNPTSRSKRR KNNLKRVCHV PAESLSSDMW SWRKYGQKPI KGSPYPRGYY KCSTLKGCMA  180
RKQVERNKSD PGMFIVTYTA EHNHPMPAQR SSLANSARQK PTTPSSNEPR KHTSSPASPV  240
TPSSPAPENP ESSRDDRGNL ADGDDDDNEV DASNMALEDD FFAGLEDFIV GPVTENFFSD  300
HFPASFQLPW LGHSNTTAAG GG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B4e-21131207279Disease resistance protein RRS1
5w3x_D4e-21131207279Disease resistance protein RRS1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00422DAPTransfer from AT4G01250Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV57661.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022895514.11e-112WRKY transcription factor 22-like
TrEMBLA0A142CCY41e-112A0A142CCY4_9LAMI; WRKY transcription factor
STRINGMigut.B01797.1.p7e-90(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA25912457
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.17e-62WRKY family protein