PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV57682.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 145aa    MW: 16576 Da    PI: 11.7478
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV57682.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.33.4e-173586156
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                ++y+GVr ++ +g+Wv+eIr p++   + r++lg+f ++e+Aa a++  + +l+g+
  KZV57682.1 35 PHYRGVRKRR-WGKWVSEIRGPRK---KNRIWLGSFPSPEMAAIAYDVSAHCLKGH 86
                68*****887.*******999854...59************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.5E-113586IPR001471AP2/ERF domain
CDDcd000181.70E-263595No hitNo description
Gene3DG3DSA:3.30.730.102.0E-293694IPR001471AP2/ERF domain
PROSITE profilePS5103222.013693IPR001471AP2/ERF domain
SMARTSM003803.0E-333699IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-213694IPR016177DNA-binding domain
PRINTSPR003671.5E-113748IPR001471AP2/ERF domain
PRINTSPR003671.5E-117595IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    Send to blast
MEQPPSRDTN DDTSVGGAAR ISSKQAGPLS ETRHPHYRGV RKRRWGKWVS EIRGPRKKNR  60
IWLGSFPSPE MAAIAYDVSA HCLKGHKARL NFPEAIEHLP RPSTSTVRDI QTSPHWQPGW  120
WLRRVAPPPK LDALMTSRRR LICRS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A7e-163693563ATERF1
3gcc_A7e-163693563ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00120DAPTransfer from AT1G01250Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV57682.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012835591.14e-45PREDICTED: ethylene-responsive transcription factor ERF023-like
SwissprotQ1ECI22e-41ERF23_ARATH; Ethylene-responsive transcription factor ERF023
TrEMBLA0A2G9HIK15e-44A0A2G9HIK1_9LAMI; Uncharacterized protein
STRINGMigut.N01538.1.p1e-44(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA138741314
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01250.16e-44ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]