PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV58292.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family AP2
Protein Properties Length: 363aa    MW: 40136.6 Da    PI: 7.6001
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV58292.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.12.2e-1367123155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s y+GV++++++gr++A+++d  ++n+ ++k+   g ++ +e Aa+a++ a++k++g
  KZV58292.1  67 SIYRGVTRHRWTGRYEAHLWDkSTWNQnQNKKGKQGAYDDEEAAARAYDLAALKYWG 123
                 57*******************6666777775555599******************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.8E-967123IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-1567132IPR016177DNA-binding domain
PROSITE profilePS5103218.51868131IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.3E-1268132IPR001471AP2/ERF domain
SMARTSM003805.3E-1968137IPR001471AP2/ERF domain
PRINTSPR003673.2E-56980IPR001471AP2/ERF domain
PRINTSPR003673.2E-5113133IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    Send to blast
MASSVTEHAT KHEETGGGGG EGSELPHFGA DQLLLYRGLK KAKKDRGCTA KERISKMPPC  60
TAGKRSSIYR GVTRHRWTGR YEAHLWDKST WNQNQNKKGK QGAYDDEEAA ARAYDLAALK  120
YWGPGTLINF PVTDYTRDLE EMQNVSREDY LASLRRKSSG FSRGISKYRP LSSNQWDTQF  180
GRVSGADCIN TTVYGDKMTT GGDYDGGFCA DRKIDLSSYI KWWGMNKFRQ TNPQSKALEE  240
SNIGCHEDAA SELKALERSS QPAQPYEMPQ LENAVDKSCH ESGSERLGVA FGPSGGLPIQ  300
RNVHQMASLL SAPLHTNYMG IDPMADHGLW ASIVPVLPSG SSHTNEVIKN ESSSDFTFFQ  360
QGG
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV58292.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011096749.11e-172AP2-like ethylene-responsive transcription factor At2g41710 isoform X2
SwissprotQ8GWK21e-123AP2L4_ARATH; AP2-like ethylene-responsive transcription factor At2g41710
TrEMBLA0A1S4ALH41e-163A0A1S4ALH4_TOBAC; AP2-like ethylene-responsive transcription factor At2g41710
STRINGXP_009783849.11e-163(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA107341921
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41710.11e-121AP2 family protein