PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV58669.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family TALE
Protein Properties Length: 771aa    MW: 84372.8 Da    PI: 6.3577
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV58669.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.52.7e-095756121954
                 HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
    Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                 Fe   ++yps +++  LA+++gL+ +qV++WF N R +
  KZV58669.1 575 FEHflHPYPSDADKHLLARQTGLSRNQVSNWFINARVR 612
                 664459******************************88 PP
2BELL119.41.6e-38437507272
        BELL   2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                 r e+q++k+kLls+l+eVd+rY +y+eq+q+v++sF++v+g g a pYt lA+ka+SrhFrcLkdaia q+
  KZV58669.1 437 RLEHQRRKVKLLSMLDEVDRRYTHYCEQMQMVVNSFDMVMGFGGAVPYTCLAQKAMSRHFRCLKDAIAAQL 507
                 779*****************************************************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005744.1E-78371505IPR006563POX domain
PfamPF075261.6E-50376504IPR006563POX domain
PROSITE profilePS5007112.536553616IPR001356Homeobox domain
CDDcd000868.25E-13556617No hitNo description
SMARTSM003898.6E-10556620IPR001356Homeobox domain
SuperFamilySSF466892.14E-17557623IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.1E-28559622IPR009057Homeodomain-like
PfamPF059203.9E-18573612IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009965Biological Processleaf morphogenesis
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 771 aa     Download sequence    Send to blast
MYVCIWGDKA ESNQQLSSLE IDDEKDDKDE DGEGDMGIAV ACGIASLSQD CDSIKFLDKE  60
TSTNPMSQDY HQGFYSFSNE FERSQQEQQQ QHIAQQIRRD KLRLQGFDPQ PPPLIGIEEK  120
ESGVVLPVYE SVGMLSEMFS FPSGGGVPTA TELLESQISQ SYRNPRPTPP NPTGAASSAD  180
WFLHRQGMVV GGGLGDSKDQ MSSINADPAA AMQLFLMNAQ PQRSPSPSSS HHHPPPTSST  240
LHMLLPNHSS SPNSSNIQTF HTTPGAAFGH QFTWVPNSED ESNPNEIPGV MEGQGLSLSL  300
SSSLQHLEAV KAEELRMREG GMLCFGQGGG GPSSSIPQYH QFKNLNSASA HLQGGVVGQN  360
HQLQVGLGSS FGAVNILRNS RYAKAAQELL EEFCSVGRGQ FKKNKLNANP SSNPSGGGDA  420
NSSSSSKDLP PLSAADRLEH QRRKVKLLSM LDEVDRRYTH YCEQMQMVVN SFDMVMGFGG  480
AVPYTCLAQK AMSRHFRCLK DAIAAQLKHT CELLGEKDGG TSGITKGETP RLKILEQSLR  540
QQRAFHQMGM MQQEAWRPQR GLPDRSVNIL RAWLFEHFLH PYPSDADKHL LARQTGLSRN  600
QVSNWFINAR VRLWKPMVEE MYQQEAKDEV DPERDHSGST SAAAAGTNSN NAQTSTPHAT  660
TTTAITPPAP KVSHEINAPE SDPSFIAINN NRQRFSENQA TIISNAPTTS QSFPAMHQTD  720
SGRTLQPQVS NESSTLIRFG SNAGDVSLTL GLRHAGNLPE KSRFSIRDFG G
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A3e-16562620563Homeobox protein Meis2
3k2a_B3e-16562620563Homeobox protein Meis2
4xrm_A3e-16562620563Homeobox protein Meis2
4xrm_B3e-16562620563Homeobox protein Meis2
4xrs_A3e-16562619158Homeobox protein Meis1
4xrs_B3e-16562619158Homeobox protein Meis1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that establishes leaf shape by repressing growth in specific subdomains of the leaf. Negatively regulates knox homeobox gene KNAT1/BP expression.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV58669.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011099269.10.0BEL1-like homeodomain protein 4
SwissprotQ9SW801e-171BLH2_ARATH; BEL1-like homeodomain protein 2
TrEMBLA0A2Z7DKF90.0A0A2Z7DKF9_9LAMI; Uncharacterized protein
STRINGMigut.H00514.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33412139
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36870.21e-135BEL1-like homeodomain 2
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]