PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0007s0087.2.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family G2-like
Protein Properties Length: 168aa    MW: 18398 Da    PI: 7.5833
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0007s0087.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like65.78.1e-21111159251
              G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                          p+l+Wt++LH++F+ a++ L G ekA Pk+i e+m+v gLt+++v SHLQ
  Kaladp0007s0087.2.p 111 PKLVWTTQLHNKFLCALDIL-GLEKAQPKKIHEVMNVAGLTRANVVSHLQ 159
                          89******************.***************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.27E-13109161IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.2E-19109159IPR009057Homeodomain-like
TIGRFAMsTIGR015571.1E-18110160IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    Send to blast
MHKPVSTAEL KNIWQFIYRY SGKAIMNDHT ENFSEDVGGS SCGSSTPGDP HFIAVSGAAT  60
QLWEGNSNAV EDPLKMYNTR CVQHADGMQI REAIVNNNAP LPVVPRTGNN PKLVWTTQLH  120
NKFLCALDIL GLEKAQPKKI HEVMNVAGLT RANVVSHLQV MCPYTIV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A4e-15109159454ARR10-B
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.12e-17response regulator 2