PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0008s0197.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 177aa    MW: 18596.5 Da    PI: 9.822
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0008s0197.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2507.2e-162776154
                  AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54
                         +++kG+r++k +g+Wv+eIr+p     +  r +lg++ tae Aa+a++ a  +l+
  Kaladp0008s0197.1.p 27 KKFKGIRRRK-WGKWVSEIRVPG----TpNRLWLGSYSTAEAAAAAHDVASFYLR 76
                         59*****998.**********82....589******************9998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.55E-172781No hitNo description
PROSITE profilePS5103218.5842885IPR001471AP2/ERF domain
SMARTSM003802.4E-222891IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.1E-222877IPR001471AP2/ERF domain
PfamPF008476.5E-92876IPR001471AP2/ERF domain
SuperFamilySSF541713.33E-152879IPR016177DNA-binding domain
PRINTSPR003672.4E-82940IPR001471AP2/ERF domain
PRINTSPR003672.4E-85167IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    Send to blast
MSNSSSSGGG GGGASEQQSK VLMSKQKKFK GIRRRKWGKW VSEIRVPGTP NRLWLGSYST  60
AEAAAAAHDV ASFYLRSSPT VEGLKEGSDV MSLSPRSVQK AASDAGMAVD AAHRVVLMQQ  120
SGGNGTSNNN GSHSRDVPVD SGREENWSFG GSWMVGDNNG GKCKPSDLNI SVDDYL*
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00158DAPTransfer from AT1G22810Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021813065.12e-37ethylene-responsive transcription factor ERF020-like
SwissprotO805423e-33ERF19_ARATH; Ethylene-responsive transcription factor ERF019
TrEMBLA0A314Y2K12e-36A0A314Y2K1_PRUYE; Ethylene-responsive transcription factor ERF020
STRINGEMJ278941e-36(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.14e-23ERF family protein
Publications ? help Back to Top
  1. Scarpeci TE,Frea VS,Zanor MI,Valle EM
    Overexpression of AtERF019 delays plant growth and senescence, and improves drought tolerance in Arabidopsis.
    J. Exp. Bot., 2017. 68(3): p. 673-685
    [PMID:28204526]