PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0011s0508.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 529aa    MW: 58931.7 Da    PI: 7.656
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0011s0508.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.73.4e-10231273241
                          XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
               bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                          ++ k  rr+++NReAAr+sR+RKka++++Le    + ++Le+e
  Kaladp0011s0508.1.p 231 RDAKTLRRLAQNREAARKSRLRKKAYVQQLESsriRLAQLEQE 273
                          678999************************9633356666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.1E-8227279No hitNo description
SMARTSM003380.0012230283IPR004827Basic-leucine zipper domain
PfamPF001702.4E-7231273IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.921232276IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.34E-7234272No hitNo description
PROSITE patternPS000360237252IPR004827Basic-leucine zipper domain
PfamPF141445.1E-31327402IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 529 aa     Download sequence    Send to blast
MASSAHNNDH PSRQQQEAKQ HGPHHQFSSS GMMMMMMQPL HPSSSSSPSL HPKLICAKDD  60
RGGAAYGLGE LDEALFLYLN RQPQHEVAEV HHQKQKQQQQ QLELEHHHHS IIDLQQQITH  120
DGGMRPTLNI FPSQPMHVEP PSATNQVNNK SNETDPRGLV VVVSGAAQQG QVVSGGSSSK  180
MVSAAEPIST DILPNSTLIL SNTNQGKRTS SNSKRGPASS SELQITRSQT RDAKTLRRLA  240
QNREAARKSR LRKKAYVQQL ESSRIRLAQL EQEIQRARSQ GAHFGGGLIL GAEQHLGLSG  300
GINNFTTDAA IFDMEYARWL EEHHRLMCEL RAAIEEHLSE NELQIYVDNC LAHFDEIMNI  360
KSIMAKTDVF HLISGSWKSP AERCFMWIGG FRPSQIIKVV MSKIEGLTDE QAVGICGLQR  420
SMEQAEAALS HGLEELNQSL SDAIVYDSLT SPPRDMTNYM GQMAMAASKL SVLEGFVRQA  480
DNLRYQAIHR LHQILMTRQT ARGLLLIAEY FHRLRALSSL WLARPPLE*
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018503110.10.0PREDICTED: transcription factor TGA2.3-like
SwissprotQ52MZ21e-177TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A314YV580.0A0A314YV58_PRUYE; BZIP transcription factor TGA10 isoform X1
TrEMBLA0A498HYB50.0A0A498HYB5_MALDO; Uncharacterized protein
STRINGXP_009357109.10.0(Pyrus x bretschneideri)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-148bZIP family protein