PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0011s1342.1.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bZIP

Protein Properties

Length: 267aa MW: 29948.3 Da PI: 6.9338

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0011s1342.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.3	5.1e-11	158	205	5	52
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 kr +r NR +A+rsR +K+++i eLe+ v L++e +aL ++ l Kaladp0011s1342.1.p 158 KRVKRILANRQSAQRSRVKKLQYISELEQSVTLLQTEVSALSPRVAFL 205 899**********************************99998776655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.0E-12	154	218	IPR004827	Basic-leucine zipper domain
Pfam	PF07716	1.0E-9	155	203	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.484	156	208	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.61E-11	158	212	No hit	No description
Gene3D	G3DSA:1.20.5.170	3.3E-13	158	210	No hit	No description
CDD	cd14703	1.54E-21	159	209	No hit	No description
PROSITE pattern	PS00036	0	161	176	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 267 aa Download sequence Send to blast
MAQLPPKVPP HMTQNWPSFP HHHHHHTLFP PPLPPPNPQS SWMDQFLDCS PNHRHRRSIS 60 DSITTFLGEE RKQHEKKDDR GHHDFDGLNE EQLMSMFSDN VVTLGDTSSV VSDPNSDNGD 120 CETGSSQKDV EMYMSSNGTG ELGGASGGGS GDTITDPKRV KRILANRQSA QRSRVKKLQY 180 ISELEQSVTL LQTEVSALSP RVAFLDHQRL ILSMDNSTLK QKIAALAQDS LFKDAHEDAL 240 KKEIERLRQV YQHQQKSNKN ASQRES*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator. {ECO:0000269\|PubMed:17719007}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_007021637.2	4e-84	PREDICTED: basic leucine zipper 34
Swissprot	Q9M2K4	1e-70	BZP61_ARATH; Basic leucine zipper 61
TrEMBL	A0A061F923	2e-82	A0A061F923_THECC; Basic-leucine zipper transcription factor family protein
STRING	EOY13162	3e-83	(Theobroma cacao)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58120.1	5e-53	bZIP family protein

Link Out ? help Back to Top
Phytozome	Kaladp0011s1342.1.p

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Gibalová A, et al. Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte. Plant Reprod, 2017. 30(1): p. 1-17 [PMID:27896439] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]