PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0011s1364.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family BES1
Protein Properties Length: 325aa    MW: 34583.3 Da    PI: 9.1857
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0011s1364.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822205.71.3e-6331482150
               DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspe 91 
                          +++r+p+wkErEnnkrRERrRRaiaaki+aGLR +Gny+lpk++DnneVl+ALc eAGw ve+DGttyrkg+kple++++ag sa+++p+
  Kaladp0011s1364.1.p   3 SGTRMPSWKERENNKRRERRRRAIAAKIFAGLRTYGNYRLPKHCDNNEVLRALCDEAGWAVEPDGTTYRKGCKPLEHMDIAGGSATVTPS 92 
                          689*************************************************************************************** PP

               DUF822  92 sslqsslkssalaspvesysaspksssfpspssldsislasa.....asllpvlsvlslvsssl 150
                          ss++        +sp++s ++sp+sssfpsp+s++ + +a a     +sl+p+l+ ls+vsss+
  Kaladp0011s1364.1.p  93 SSYH--------PSPCTSFNPSPASSSFPSPTSTSYAAAAAAnlangNSLIPWLKSLSSVSSSA 148
                          ****........9******************9999887776678888***********999986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056875.6E-633142IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MKSGTRMPSW KERENNKRRE RRRRAIAAKI FAGLRTYGNY RLPKHCDNNE VLRALCDEAG  60
WAVEPDGTTY RKGCKPLEHM DIAGGSATVT PSSSYHPSPC TSFNPSPASS SFPSPTSTSY  120
AAAAAANLAN GNSLIPWLKS LSSVSSSATS SKLPQLYFHG NSISAPVTPP FTSPSAQSPR  180
SKMDWTSQTA RMGWGSSSYS FLPSSTPTSP GHQTQPDSEW LSGGPTSPTF SLVAHNPFTL  240
KGNVAGGSSG SRMWTPGQSG TCSPAIPASF DQNADIPMAQ VIHDEFAFGS NKASGMVKAW  300
EGERIHEDSG SDDLELSLGT TRAR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A4e-24686372451Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B4e-24686372451Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C4e-24686372451Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D4e-24686372451Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010644097.11e-136PREDICTED: BES1/BZR1 homolog protein 4
SwissprotQ9ZV881e-115BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A1R3JCF01e-134A0A1R3JCF0_9ROSI; BZR1, transcriptional repressor
STRINGXP_009352718.11e-134(Pyrus x bretschneideri)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.14e-92BES1/BZR1 homolog 4