PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0015s0089.1.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

FAR1

Protein Properties

Length: 222aa MW: 25199.1 Da PI: 8.6007

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0015s0089.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	86.2	5.1e-27	96	182	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Yn+YA + GF +rk+ +++s+r+gei+++++vC+keg+++ e+++ ++++++r rtgC ak+++ ++ +gkw v+k+ eHnH+l+ Kaladp0015s0089.1.p 96 AYNQYAARRGFGIRKHFTTRSRRSGEIIRKEYVCNKEGFKKVESQT-TDHKKRRRDARTGCLAKMEIGQK-SGKWIVDKFTDEHNHPLT 182 5***************************************9999.99999999*********99.9*************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	5.4E-25	96	182	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence Send to blast
MNRSINPPKP RVARTKPGEG DDGASLFTDF SSTQHSNLED FMDDESFLNN SLTEDAPRQM 60 EFGNTDNDAI FDASCEKVVD SLSGKYYDTM EEAYDAYNQY AARRGFGIRK HFTTRSRRSG 120 EIIRKEYVCN KEGFKKVESQ TTDHKKRRRD ARTGCLAKME IGQKSGKWIV DKFTDEHNHP 180 LTSPNKVMKH LSHCSVPDSI LGEKGKEREG KGRKKGVPEF F*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	203	214	KGKEREGKGRKK

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_023737438.1	2e-32	protein FAR1-RELATED SEQUENCE 7-like
TrEMBL	A0A2J6MEZ6	2e-29	A0A2J6MEZ6_LACSA; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	5e-20	FAR1 family protein

Link Out ? help Back to Top
Phytozome	Kaladp0015s0089.1.p