PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0016s0392.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 432aa    MW: 48236.3 Da    PI: 7.7399
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0016s0392.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.83.2e-10146186545
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                          k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Kaladp0016s0392.1.p 146 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 186
                          788*************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.4E-8142211IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415144188IPR004827Basic-leucine zipper domain
CDDcd147087.09E-23146198No hitNo description
SuperFamilySSF579597.03E-7146189No hitNo description
PfamPF001707.1E-7146186IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.5E-7147190No hitNo description
PROSITE patternPS000360149164IPR004827Basic-leucine zipper domain
PfamPF141441.6E-32228303IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    Send to blast
MLPSSSRHLF RSDQRSATTD HHHVSQLSSS ELLFYSSVLL LIIIVHLLYS PWSNLDATPV  60
FIARVSPSSS PASAQFLPAW SSCCCLAFDP TSYLLHQTWR DYSMADVSQG TDTSTDVEEE  120
KNQGFGMVLS TGNSSDRSKD KPGDQKTLRR LAQNREAARK SRLRKKAYVQ QLESSRLKLT  180
QLEQELQRAR QQGIFISSSG DHAHSMSGNG ALAFDAEYTR WLEEHNKQIN ELRAAVSSHA  240
GDTELRTIVD NVTAHYDDIF RLKDTAAKAD VFHILSGMWK TPAERCFLWI GGFRSSELLK  300
LLVNQLEPLT EQQLVAIYNL QQSSQQAEDA LSQGMELLQQ SLAETLASGS PSPSGNSGNV  360
ANYMGQMAMA MGKLGTLEGF LRQADNLRQQ TLERMHKILT TRQSARALLA IHDYFSRLRA  420
LSSLWLARPR E*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011467317.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X1
RefseqXP_011467322.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X7
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A0D2TRW40.0A0A0D2TRW4_GOSRA; Uncharacterized protein
STRINGGorai.007G352600.10.0(Gossypium raimondii)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-148TGACG motif-binding factor 6