PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0016s0392.4.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 421aa    MW: 46962.9 Da    PI: 8.0456
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0016s0392.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.83.1e-10135175545
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                          k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Kaladp0016s0392.4.p 135 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 175
                          788*************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.4E-8131200IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415133177IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.96E-7135178No hitNo description
CDDcd147081.38E-22135187No hitNo description
PfamPF001706.8E-7135175IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.4E-7136179No hitNo description
PROSITE patternPS000360138153IPR004827Basic-leucine zipper domain
PfamPF141441.6E-32217292IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 421 aa     Download sequence    Send to blast
MLPSSSRHLF RSDQRSATTD HHHVSQLSSS ELLFYSSVLL LIIIVHLLYS PWSNLDATPV  60
FIARVSPSSS PASAQFLPAW SSCCCLTWRD YSMADVSQGT DTSTDVEEEK NQGFGMVLST  120
GNSSDRSKDK PGDQKTLRRL AQNREAARKS RLRKKAYVQQ LESSRLKLTQ LEQELQRARQ  180
QGIFISSSGD HAHSMSGNGA LAFDAEYTRW LEEHNKQINE LRAAVSSHAG DTELRTIVDN  240
VTAHYDDIFR LKDTAAKADV FHILSGMWKT PAERCFLWIG GFRSSELLKL LVNQLEPLTE  300
QQLVAIYNLQ QSSQQAEDAL SQGMELLQQS LAETLASGSP SPSGNSGNVA NYMGQMAMAM  360
GKLGTLEGFL RQADNLRQQT LERMHKILTT RQSARALLAI HDYFSRLRAL SSLWLARPRE  420
*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011467322.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X7
RefseqXP_012434880.10.0PREDICTED: transcription factor HBP-1b(c38)-like
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A0D2TRW40.0A0A0D2TRW4_GOSRA; Uncharacterized protein
STRINGGorai.007G352600.10.0(Gossypium raimondii)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-149TGACG motif-binding factor 6