PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0020s0045.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 334aa    MW: 37321 Da    PI: 9.0711
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0020s0045.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.44.2e-104487245
                         XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1  2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                         k++k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Kaladp0020s0045.1.p 44 KDSKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 87
                         78999**************************9777776666544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.9E-83789No hitNo description
SMARTSM003383.9E-843106IPR004827Basic-leucine zipper domain
PfamPF001705.7E-74487IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.3354589IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.25E-74789No hitNo description
PROSITE patternPS0003605065IPR004827Basic-leucine zipper domain
PfamPF141441.1E-31130205IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MADVSPRTDI STDVDTDDRN KRFDRAVSHV NTASDSSDRS KDNKDSKTLR RLAQNREAAR  60
KSRLRKKAYV QQLESSRLKL TQLEQELQRA RKQGVFISSS GDQLHSVSGN AGVVAFDVEY  120
ARWLEDQNQQ INELRSAVSS HACDAELRIV VDNIVVHYDE IFRLKGNAAK ADVFHLLSGM  180
WKTPAERCFL WLGGFRSSEL LKLLVNQLEP LTEQQVLGIN NLQQSSQQAE DALSQGMEAL  240
QQSLAETLSS GSLTSVGSSG NVANYMGQMA MAMGKLGTLE GFIQQADNLR QQTLQQMHRI  300
LTTRQSARAL LAIHDYFSRL RALSSLWLAR PRE*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00349DAPTransfer from AT3G12250Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027354195.10.0transcription factor TGA2.2-like isoform X2
RefseqXP_027354196.10.0transcription factor TGA2.2-like isoform X2
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A371F7B70.0A0A371F7B7_MUCPR; Transcription factor TGAL1 (Fragment)
STRINGXP_007133721.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-163TGACG motif-binding factor 6