PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0020s0045.2.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 320aa    MW: 35738.4 Da    PI: 9.1972
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0020s0045.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.44e-103073245
                         XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1  2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                         k++k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Kaladp0020s0045.2.p 30 KDSKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 73
                         78999**************************9777776666544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.8E-82375No hitNo description
SMARTSM003383.9E-82992IPR004827Basic-leucine zipper domain
PfamPF001705.3E-73073IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.3353175IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.06E-73375No hitNo description
PROSITE patternPS0003603651IPR004827Basic-leucine zipper domain
PfamPF141449.8E-32116191IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MICQTCVQFD RAVSHVNTAS DSSDRSKDNK DSKTLRRLAQ NREAARKSRL RKKAYVQQLE  60
SSRLKLTQLE QELQRARKQG VFISSSGDQL HSVSGNAGVV AFDVEYARWL EDQNQQINEL  120
RSAVSSHACD AELRIVVDNI VVHYDEIFRL KGNAAKADVF HLLSGMWKTP AERCFLWLGG  180
FRSSELLKLL VNQLEPLTEQ QVLGINNLQQ SSQQAEDALS QGMEALQQSL AETLSSGSLT  240
SVGSSGNVAN YMGQMAMAMG KLGTLEGFIQ QADNLRQQTL QQMHRILTTR QSARALLAIH  300
DYFSRLRALS SLWLARPRE*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00349DAPTransfer from AT3G12250Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027354195.10.0transcription factor TGA2.2-like isoform X2
RefseqXP_027354196.10.0transcription factor TGA2.2-like isoform X2
SwissprotQ6IVC21e-180TGAL1_ORYSJ; Transcription factor TGAL1
TrEMBLA0A371F7B70.0A0A371F7B7_MUCPR; Transcription factor TGAL1 (Fragment)
STRINGLus100241400.0(Linum usitatissimum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-155bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]