PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0020s0147.4.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bZIP

Protein Properties

Length: 390aa MW: 42857.4 Da PI: 9.7613

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0020s0147.4.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43	1e-13	311	360	5	54
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 +r rr++kNRe+A rsR+RK+a++ eLe+++++L + N++L k+ +e+ + Kaladp0020s0147.4.p 311 RRHRRMIKNRESAARSRARKQAYTLELETEIAKLREVNEELHKKQDEMME 360 699***************************************99888765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.9E-9	307	372	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.312	309	360	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.0E-12	311	360	No hit	No description
Pfam	PF00170	1.3E-11	311	361	IPR004827	Basic-leucine zipper domain
CDD	cd14707	1.17E-24	311	365	No hit	No description
SuperFamily	SSF57959	1.9E-10	311	360	No hit	No description
PROSITE pattern	PS00036	0	314	329	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0006629	Biological Process	lipid metabolic process
GO:0009506	Cellular Component	plasmodesma
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0008081	Molecular Function	phosphoric diester hydrolase activity
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence Send to blast
MGSYMEFRSF GDGTQVDGNG GRSQGSNFPL ARQSSIYSLT FDELQTNFSG FGKDFGSMNM 60 DELLKNIWTA EEAQVNNTSA SCSSAAMAGP AVGCVGALQK QGSLTLPRTL SQKTVDQVWK 120 DLYSEGPKVA DSVTFQPGQP TLGEMTLEEF LLKAGVVRED HQHPRVTNRV PVDKLSDYGF 180 GAVNPPDGIP LGVGVIGPSQ LGRAQTQARH PLFPKPANVT FSSPRRSNHS HLPSIAPKSV 240 MIGMADTYSN YKHYSGAGTG TGMACSMKKM AQDAWERNSE DSSSLGPSPH GCSPVTRGRR 300 GGAGMERAVE RRHRRMIKNR ESAARSRARK QAYTLELETE IAKLREVNEE LHKKQDEMME 360 IQKDEMIQKM RLQWGRKRVC LRRTLTGPW*

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence Send to blast

MGSYMEFRSF GDGTQVDGNG GRSQGSNFPL ARQSSIYSLT FDELQTNFSG FGKDFGSMNM  60
DELLKNIWTA EEAQVNNTSA SCSSAAMAGP AVGCVGALQK QGSLTLPRTL SQKTVDQVWK  120
DLYSEGPKVA DSVTFQPGQP TLGEMTLEEF LLKAGVVRED HQHPRVTNRV PVDKLSDYGF  180
GAVNPPDGIP LGVGVIGPSQ LGRAQTQARH PLFPKPANVT FSSPRRSNHS HLPSIAPKSV  240
MIGMADTYSN YKHYSGAGTG TGMACSMKKM AQDAWERNSE DSSSLGPSPH GCSPVTRGRR  300
GGAGMERAVE RRHRRMIKNR ESAARSRARK QAYTLELETE IAKLREVNEE LHKKQDEMME  360
IQKDEMIQKM RLQWGRKRVC LRRTLTGPW*

Functional Description ? help Back to Top
Source	Description
UniProt	Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:11884679, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16463099}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA) and cold. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_018817895.1	1e-115	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7
Refseq	XP_018817896.1	1e-115	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7
Swissprot	Q9M7Q2	5e-89	AI5L7_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 7
TrEMBL	A0A2I4EER7	1e-113	A0A2I4EER7_JUGRE; ABSCISIC ACID-INSENSITIVE 5-like protein 7
STRING	XP_009774081.1	1e-110	(Nicotiana sylvestris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19290.1	1e-80	ABRE binding factor 4

Link Out ? help Back to Top
Phytozome	Kaladp0020s0147.4.p

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Fernando VCD,Al Khateeb W,Belmonte MF,Schroeder DF Role of Arabidopsis ABF1/3/4 during det1 germination in salt and osmotic stress conditions. Plant Mol. Biol., 2018. 97(1-2): p. 149-163 [PMID:29680877] Muñiz García MN,Cortelezzi JI,Fumagalli M,Capiati DA Expression of the Arabidopsis ABF4 gene in potato increases tuber yield, improves tuber quality and enhances salt and drought tolerance. Plant Mol. Biol., 2018. 98(1-2): p. 137-152 [PMID:30143991]