PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0020s0162.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 162aa    MW: 17752.5 Da    PI: 6.388
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0020s0162.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.70.0008396113623
                          TTEEESSHHHHHHHHHHT CS
              zf-C2H2   6 CgksFsrksnLkrHirtH 23 
                          Cg+ F +  +L++H+ +H
  Kaladp0020s0162.1.p  96 CGRQFQTDGELVQHMASH 113
                          ****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    Send to blast
MASHNGSGER SRNSNGSQNN QQDGNGGRQS DDSRDNRERQ PTVIEMIVIV TLVALATGSG  60
TVFHETTTVL EFGVSVPPPS PPPPAPEPEA LYYCWCGRQF QTDGELVQHM ASHNQGVTVP  120
PPDEGCSSSQ SPPKKRRRVE QQHETQSRLH NVRDHFWMPA V*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1134138KRRRV