PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0024s0465.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family EIL
Protein Properties Length: 416aa    MW: 47056.2 Da    PI: 6.5328
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0024s0465.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3112.86.3e-3522112198
                          XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                 EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasds 90 
                          +elkkrmwk +++++r+k+++ ++   ++        +  +e +  kkm+raQD+iLkYM+k+mevcn +GfvYgi+pe gkpv+g+sds
  Kaladp0024s0465.1.p  22 DELKKRMWKGRVRMQRMKQKRSEED--EDGR-----PEVKQELSTLKKMARAQDSILKYMVKIMEVCNGKGFVYGIVPERGKPVTGSSDS 104
                          79*************9999888744..4432.....234589999********************************************* PP

                          XXXXXXXX CS
                 EIN3  91 LraWWkek 98 
                          Lr+WWkek
  Kaladp0024s0465.1.p 105 LREWWKEK 112
                          *******8 PP
2EIN3206.42.2e-63119280128284
                          ..XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT.--TT--.-----GGG--HHHHHHHHHHHHHH CS
                 EIN3 128 ersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelg.lskdqgtppykkphdlkkawkvsvLtavikh 216
                          ++ s+ h l+elqDTtlgS+Lsalmqhc ppqrrfple+g++ PWWPtG e+wwge+g  +++qg+ppy+kp dlkkawkvsvL+avikh
  Kaladp0024s0465.1.p 119 DPVSSMHLLQELQDTTLGSMLSALMQHCVPPQRRFPLERGLALPWWPTGVEAWWGEQGvRAEEQGPPPYRKPDDLKKAWKVSVLAAVIKH 208
                          678999****************************************************6666777************************* PP

                          TGGGH.HHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX...XXXXXXXXXXXXXXXXXXX CS
                 EIN3 217 mspti.eeirelerqskylqdkmsakesfallsvlnqeekecatvsahss...slrkqspkvtlsceqkedv 284
                          m+p+    +r+l+rqsk+lq+km+a+ ++++++v++qee++ +  +   +    + +++ ++++  +  e +
  Kaladp0024s0465.1.p 209 MQPDNlGLMRRLVRQSKCLQNKMTARVTATWSKVVSQEEALTRMTKKCLRistPTDDNDDDLQMGRNRPEKR 280
                          **9751679******************************988755554332113333333333333333333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.3E-3322112No hitNo description
PfamPF048731.1E-58119247No hitNo description
Gene3DG3DSA:1.10.3180.103.1E-61121253IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.57E-52124250IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    Send to blast
MVEIVSELDP VGGSDDDDIS YDELKKRMWK GRVRMQRMKQ KRSEEDEDGR PEVKQELSTL  60
KKMARAQDSI LKYMVKIMEV CNGKGFVYGI VPERGKPVTG SSDSLREWWK EKALGLELDP  120
VSSMHLLQEL QDTTLGSMLS ALMQHCVPPQ RRFPLERGLA LPWWPTGVEA WWGEQGVRAE  180
EQGPPPYRKP DDLKKAWKVS VLAAVIKHMQ PDNLGLMRRL VRQSKCLQNK MTARVTATWS  240
KVVSQEEALT RMTKKCLRIS TPTDDNDDDL QMGRNRPEKR QCIFNRTAAV SNISNSGPRQ  300
LGTSDRQSLN APPASLTDWT EMEPSEGNQE SQYLQIKGQS NMKTGSNDNS TIEDVYRAHW  360
RGQLTPEFGT DSSFGFDKGP EMDLNSGPST HELLLQGGAS FWDSVYMSSL YDQHN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A4e-551222511128Protein ETHYLENE INSENSITIVE 3
4zds_B4e-551222511128Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021608830.11e-124putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9LX161e-105EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A2P5RM401e-122A0A2P5RM40_GOSBA; Uncharacterized protein
STRINGXP_006464249.11e-120(Citrus sinensis)
STRINGGorai.003G043500.11e-120(Gossypium raimondii)
STRINGXP_006428161.11e-120(Citrus clementina)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-108EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]