PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0033s0006.2.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bZIP

Protein Properties

Length: 784aa MW: 85626.6 Da PI: 5.1292

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0033s0006.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	24.4	6.4e-08	8	52	17	61
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 A r+R++ ++e +L+ + k+++aeN++L +e+e+l+k+v+ l Kaladp0033s0006.2.p 8 ACRCREKQRKESSRLQAENKKFTAENRMLVEENERLQKQVSHLSY 52 669*************************************98865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd14686	2.70E-7	8	48	No hit	No description
Gene3D	G3DSA:1.20.5.170	9.5E-5	8	50	No hit	No description
PROSITE profile	PS50848	23.109	92	311	IPR002913	START domain
SMART	SM00234	8.1E-33	101	311	IPR002913	START domain
SuperFamily	SSF55961	7.97E-27	102	313	No hit	No description
Pfam	PF01852	1.7E-42	102	309	IPR002913	START domain
Gene3D	G3DSA:3.30.530.20	6.7E-17	140	277	IPR023393	START-like domain
Pfam	PF08670	1.8E-45	638	782	IPR013978	MEKHLA

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding
GO:0008289	Molecular Function	lipid binding

Sequence ? help Back to Top
Protein Sequence Length: 784 aa Download sequence Send to blast
MLSGFGMACR CREKQRKESS RLQAENKKFT AENRMLVEEN ERLQKQVSHL SYDNGFMRQK 60 LRSRSATTDA SCESVVTPHS QQNPTHQPRE RDANSPAGLL AIAEETQAEF LSKATGIAVN 120 WIQMVGMKPG PDSVEIVAVS RNCAGVAARA CGLVSLEPMK VAEILKDTPA WFRDCRTHNV 180 LTVLPTANGG TLELIYMQTY APTTMASARD FWKLRFISPI EDGGLVVCER SLNASTGGST 240 GPSSPNFIRA EVFPSGFLIR PCEGGGSIIH IVDHLDLDPC SAPEILRPLY ESSEIIAQKI 300 SFAALRHIRQ IAQENCGEIK YGGGKQPAVL RTFSQRLSRG FNDAVNGLVD DGWSLLDSVE 360 MDDVTISINM SASKFIDSQS NSAALFPAFG GGVLCAKVSM LLEDVAPAHL VRFIREHRSE 420 WADYGIDAYW AASVRASPSA IPCSTPSALR SNQVILPLAH TIELEEFLEV VRLEGQAFCL 480 EDVAFARDMF LLQLCSGINE NEVGPCAQIV FAPIDESFAD DALLLPSGFR VISLENKADE 540 PGATRTLDLA SVLEVHTTGA LAAGDSGANH IKQRAVLTMA FQFTFENHLR DSVASMARQY 600 VRSVVGAVQR VAVVLSPARL GSQMVVENSF PGSTEVITLA RWITQSYKIH TGEELVRVCS 660 QAGDSVLKLL WQFSEAVMCC SLTTNAPPVF TFANQSGLDM LETTFGSLQD IKLEKTLDEA 720 GRKSLLAEFP KITQQGFAYL PAGNCMSSMG RPISYDQAIA WMVLDDEEVN HCLAFMFVNW 780 SFM*

Sequence ? help Back to Top

Protein Sequence Length: 784 aa Download sequence Send to blast

MLSGFGMACR CREKQRKESS RLQAENKKFT AENRMLVEEN ERLQKQVSHL SYDNGFMRQK  60
LRSRSATTDA SCESVVTPHS QQNPTHQPRE RDANSPAGLL AIAEETQAEF LSKATGIAVN  120
WIQMVGMKPG PDSVEIVAVS RNCAGVAARA CGLVSLEPMK VAEILKDTPA WFRDCRTHNV  180
LTVLPTANGG TLELIYMQTY APTTMASARD FWKLRFISPI EDGGLVVCER SLNASTGGST  240
GPSSPNFIRA EVFPSGFLIR PCEGGGSIIH IVDHLDLDPC SAPEILRPLY ESSEIIAQKI  300
SFAALRHIRQ IAQENCGEIK YGGGKQPAVL RTFSQRLSRG FNDAVNGLVD DGWSLLDSVE  360
MDDVTISINM SASKFIDSQS NSAALFPAFG GGVLCAKVSM LLEDVAPAHL VRFIREHRSE  420
WADYGIDAYW AASVRASPSA IPCSTPSALR SNQVILPLAH TIELEEFLEV VRLEGQAFCL  480
EDVAFARDMF LLQLCSGINE NEVGPCAQIV FAPIDESFAD DALLLPSGFR VISLENKADE  540
PGATRTLDLA SVLEVHTTGA LAAGDSGANH IKQRAVLTMA FQFTFENHLR DSVASMARQY  600
VRSVVGAVQR VAVVLSPARL GSQMVVENSF PGSTEVITLA RWITQSYKIH TGEELVRVCS  660
QAGDSVLKLL WQFSEAVMCC SLTTNAPPVF TFANQSGLDM LETTFGSLQD IKLEKTLDEA  720
GRKSLLAEFP KITQQGFAYL PAGNCMSSMG RPISYDQAIA WMVLDDEEVN HCLAFMFVNW  780
SFM*

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor. {ECO:0000250}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002281868.2	0.0	PREDICTED: homeobox-leucine zipper protein HOX32
Swissprot	Q6AST1	0.0	HOX32_ORYSJ; Homeobox-leucine zipper protein HOX32
TrEMBL	A0A061G7E3	0.0	A0A061G7E3_THECC; Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein isoform 5
STRING	EOY25496	0.0	(Theobroma cacao)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G34710.1	0.0	HD-ZIP family protein

Link Out ? help Back to Top
Phytozome	Kaladp0033s0006.2.p

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Itoh J,Hibara K,Sato Y,Nagato Y Developmental role and auxin responsiveness of Class III homeodomain leucine zipper gene family members in rice. Plant Physiol., 2008. 147(4): p. 1960-75 [PMID:18567825] Li YY, et al. Overexpression of OsHox32 Results in Pleiotropic Effects on Plant Type Architecture and Leaf Development in Rice. Rice (N Y), 2016. 9(1): p. 46 [PMID:27624698]