PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0033s0295.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NAC
Protein Properties Length: 140aa    MW: 15871.5 Da    PI: 10.4355
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0033s0295.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM57.44.9e-1821314128
                  NAM   4 GfrFhPtdeelvveyLkkkvegkk...leleevikevdiy.kvePwdLpkkvkaeek.ewyfFskrdkkyatgkrknr..atksgyWkat 86 
                          G+ F+ +de+++ +yL++  +  +     +++ i+e+d+y ++ Pw++ +++ + ++ + y F+k +k+ a+  rk r  +  +g+Wk +
  Kaladp0033s0295.1.p   2 GVDFRSSDEDIIGFYLNRLFTVGSplaSMVSDSIHEIDVYgEAPPWEIAAQLPEVQRlDFYVFAKLKKRIAN--RKLRivSNGKGTWKGQ 89 
                          99****************988777676444577******944689***965544333377888887777665..777732455999**** PP

                  NAM  87 gkdkevlskkgelvglkktLvfy...kgrapkgektdWvmheyrl 128
                             k++++  g+lvg kkt+ f       ++k +  +W m  y++
  Kaladp0033s0295.1.p  90 SIRKKIVV--GSLVGQKKTFSFMaddY-GKKKRVTLHWNMTKYSV 131
                          *******9..889**********5422.444447889******87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100522.2431139IPR003441NAC domain
PfamPF023655.8E-112130IPR003441NAC domain
SuperFamilySSF1019413.27E-172134IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    Send to blast
MGVDFRSSDE DIIGFYLNRL FTVGSPLASM VSDSIHEIDV YGEAPPWEIA AQLPEVQRLD  60
FYVFAKLKKR IANRKLRIVS NGKGTWKGQS IRKKIVVGSL VGQKKTFSFM ADDYGKKKRV  120
TLHWNMTKYS VENNLVILK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10480.13e-10NAC domain containing protein 50