PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0036s0075.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 285aa    MW: 32481.9 Da    PI: 7.7729
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0036s0075.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.71.8e-12102153155
                          CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +r +h e+Er+RR+++N+ ++ +r+l+P +   ++ K + a+i   A++++k+L+
  Kaladp0036s0075.1.p 102 QRLTHIEVERNRRKQVNEYLSAIRSLMPDS---YADKGDQASIIGGAIKFVKELE 153
                          799***************************...*******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000837.00E-11100157No hitNo description
Gene3DG3DSA:4.10.280.101.7E-12100157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.424101152IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.19E-15101165IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.7E-10102153IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.8E-8107158IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MPLRAVVYQA EFFNHGRKDH HHTLHSFYDD SQSSYDPFHF LTSQAHTCNC ANSICWPPSV  60
VPPENETENL LPSSGYVQKK RQACHRRRHS RGEICEEAMR HQRLTHIEVE RNRRKQVNEY  120
LSAIRSLMPD SYADKGDQAS IIGGAIKFVK ELEQKLQWLE SHKHNKNSSP SVPFSNFLTS  180
PNSESSTCLR SRAADVEVSM AECFVNLKIR VITGAVKKPL LPRILQYLDE YKLTVLHLNA  240
CGVDRVVLYT ICMKVEDECK LTSEDEIAIA MHQVLSTIQR EAMG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17887KKRQACHRRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.12e-44bHLH family protein