PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0037s0398.2.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family G2-like
Protein Properties Length: 173aa    MW: 19291 Da    PI: 6.9773
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0037s0398.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like50.35.1e-1618462755
              G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55
                         AtPk +l++m+v gLt++hvkSHLQkYRl
  Kaladp0037s0398.2.p 18 ATPKGVLRVMGVSGLTIYHVKSHLQKYRL 46
                         9***************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.4E-151847IPR009057Homeodomain-like
SuperFamilySSF466894.12E-61846IPR009057Homeodomain-like
TIGRFAMsTIGR015571.5E-111847IPR006447Myb domain, plants
PfamPF143797.8E-2579124IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MIALWMLLHN SVDLTVGATP KGVLRVMGVS GLTIYHVKSH LQKYRLAKYL PESSADGSKD  60
DKKGSGDSLS SLDSPPGLQI NEALRMQMEV QRRLHEQLEV QRQLQMRIEA QGKYLQKIIE  120
EQQKLGSTIK ASELEALDEE QPTSGAGGQS GPRKRLRIDV EEQSKVWDRE DP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022633335.12e-75myb family transcription factor PHL7 isoform X4
SwissprotQ9SJW01e-56PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A3Q0ENW35e-74A0A3Q0ENW3_VIGRR; myb family transcription factor PHL7 isoform X4
STRINGXP_009345372.12e-68(Pyrus x bretschneideri)
STRINGXP_009347649.12e-68(Pyrus x bretschneideri)
STRINGXP_009347650.12e-68(Pyrus x bretschneideri)
STRINGXP_008385743.12e-68(Malus domestica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.16e-47G2-like family protein