PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0037s0422.1.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 318aa MW: 34500.1 Da PI: 6.8474

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0037s0422.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	20.5	8.4e-07	272	299	3	30
HHHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 3 rahnerErrRRdriNsafeeLrellPka 30 +h+ +Er RR++i +++ L+el+P + Kaladp0037s0422.1.p 272 NSHSLAERVRREKISERMKLLQELVPGC 299 58************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	1.26E-5	267	304	No hit	No description
SuperFamily	SSF47459	4.19E-9	267	310	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	11.039	269	317	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	4.7E-8	273	307	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence Send to blast
MGGDADDGKV DLGFQQNSNK STMSCSTSGM NTNPLPNKVS GIAMSSIPMF KSSAGSDPHF 60 GTHWDPLLAI HQNENFGGGS SMVSHCGYAN PPYPIDNQGM SGTHLLQYPS SDSTLVDLPK 120 IQRFGSGNFV DMAGLYGLPA LGATASSSCY QNYLSNHEVG IHRHSTDRAG SQDDCQVSEE 180 RALEASPNGK RRRSVESASA LNSNKMTEGE QQKDMSEGSF DQPSEQDDEK QNQIRRLQNK 240 QSGKQAKDNS QTEDGTKDTY IHVRARRGQA TNSHSLAERV RREKISERMK LLQELVPGCN 300 KVDKKTLIAL TKPLDCG*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008220406.1	1e-102	PREDICTED: transcription factor bHLH74 isoform X1
Refseq	XP_008220407.1	1e-102	PREDICTED: transcription factor bHLH74 isoform X1
Refseq	XP_021828011.1	1e-102	transcription factor bHLH74 isoform X1
Refseq	XP_021828012.1	1e-102	transcription factor bHLH74 isoform X1
Refseq	XP_021828013.1	1e-102	transcription factor bHLH74 isoform X1
Refseq	XP_021828014.1	1e-102	transcription factor bHLH74 isoform X1
Refseq	XP_021828015.1	1e-102	transcription factor bHLH74 isoform X2
TrEMBL	A0A251RBF7	1e-99	A0A251RBF7_PRUPE; Uncharacterized protein
TrEMBL	A0A251RBG4	1e-99	A0A251RBG4_PRUPE; Uncharacterized protein
STRING	XP_008220406.1	1e-102	(Prunus mume)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	6e-36	bHLH family protein

Link Out ? help Back to Top
Phytozome	Kaladp0037s0422.1.p