PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0037s0466.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 191aa    MW: 21176.2 Da    PI: 11.3752
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0037s0466.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.32.6e-153074149
                  AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaa 49
                         ++++G+r ++ +gr++AeIrd ++    ++r++lg+f++ e A +a++aa
  Kaladp0037s0466.1.p 30 PKFRGIRKRP-WGRFAAEIRDsWK----KTRVWLGTFDSVEAATRAYDAA 74
                         79********.**********993....5*******************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.57E-233088No hitNo description
PfamPF008477.2E-103074IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-183189IPR016177DNA-binding domain
SMARTSM003801.7E-283194IPR001471AP2/ERF domain
PROSITE profilePS5103220.3893188IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.5E-263188IPR001471AP2/ERF domain
PRINTSPR003679.2E-93243IPR001471AP2/ERF domain
PRINTSPR003679.2E-95470IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MGKVRGGATA VASLGNQVKD APLEIGSAEP KFRGIRKRPW GRFAAEIRDS WKKTRVWLGT  60
FDSVEAATRA YDAATWSLRC PKARTNFPTP PSSSIIFIFH RVAFEPSSSI VFMFGVVFES  120
SLSSSEPSSN ISKFNSSSSS SRAELELKKT LSSRVRALRI KARRVRAHVY INRAEFEYCD  180
TRLGSARLHL *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-202588872Ethylene-responsive transcription factor ERF096
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.18e-29ethylene responsive element binding factor 3