PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0038s0059.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GeBP
Protein Properties Length: 445aa    MW: 49903.7 Da    PI: 4.3534
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0038s0059.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573113.31.5e-35134233198
               DUF573   1 klfqrlwseeDeivlLqGlidfkaktgkspsd..didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqki 88 
                          klfqrlw++eDei lLqG++d  +++g+s+ +  d+  fy+++k++++++++k+qlveK+rrLKkK+++  ++++sgke++f+++hdq +
  Kaladp0038s0059.1.p 134 KLFQRLWTDEDEIGLLQGFLDHSTQRGSSQNNphDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVLSRVSSGKEIQFKSPHDQAT 223
                          579************************9555446******************************************************** PP

               DUF573  89 felskkiWgs 98 
                          fe++ kiWg+
  Kaladp0038s0059.1.p 224 FEIACKIWGT 233
                          ********95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045043.4E-33136232IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    Send to blast
MSSDEDQQAP IAGHNEEDDE PDEIDDDEET DEEEEEEDDG EGELERNNNV MEEEEEDVDV  60
EEVDRTISLS SLNSDPTRSV TIAVPAPDIP VAEAAAEIAS ESTAKRLRIL EDEPIGELQR  120
VNPNPPPSDD QARKLFQRLW TDEDEIGLLQ GFLDHSTQRG SSQNNPHDTA LFYDQIKSKL  180
QLDFNKNQLV EKLRRLKKKY RNVLSRVSSG KEIQFKSPHD QATFEIACKI WGTAQNSQCS  240
KDHIQQPQQQ MRVADVDDDM PPNFNPASAT NLNLNFVSNS NNFNSSGGYS NYHHSDRAGV  300
DEWKSQQQQQ KAKKRIRVKM EDIRSSTEHK AAVATNSSPS QIPIWGPPGT NLTAPSLVEE  360
IVKNRISPLM YDIKGNRGYG GLGDGIVRPV PLSFASPVNA IGTDATDDRW RKQQILELEV  420
YSKRLELVQE QIKLTLEQLR STGS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.24e-49DNA-binding storekeeper protein-related transcriptional regulator