PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0039s0456.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 383aa    MW: 42440.6 Da    PI: 6.2644
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0039s0456.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.33.8e-09182236559
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                          kr++r   NR +A rs +RK  +i+eLe+k+++L++e ++L  +l+ l+     l
  Kaladp0039s0456.1.p 182 KRAKRIWANRQSAARSKERKMRYIAELERKIQTLQTEATSLTAQLNLLQRDTNGL 236
                          9*********************************************998776655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.1E-15178242IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.806180243IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.7E-7180236No hitNo description
PfamPF001707.0E-8182236IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.53E-10182233No hitNo description
CDDcd147031.83E-23183232No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    Send to blast
MTSTSLGAKE ELGIRHFSQD ISQMPEYPPK KSAHRRVHSE IIMLPDDLFF DNDLGIVPGI  60
DGPSFSDDTD EALVSMYRDM DKIHASSATS CQVGGSSQEV AGPDLAPLSA PGESTPQASG  120
GGFAGLTDKP RIRHHHSQSM DGLTSIKQEL LMSASEESSS ASDSKKAMSA VKLAELALVD  180
PKRAKRIWAN RQSAARSKER KMRYIAELER KIQTLQTEAT SLTAQLNLLQ RDTNGLMAEN  240
NELKVHLQRM EQQVLMQDAL NEALKEEIQH MKLLTGQAML NGGPVMNYPY GATQYYPNNQ  300
GMHTLMAAQQ FQHIQIHAHK QQQQFQQLQH HPPRDQQQHQ PLQELHWQPD AIVTGSIPSP  360
PQKESDTDIY PPTDKDSTLP SS*
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor with an activatory role.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027119584.11e-142probable transcription factor PosF21
RefseqXP_027119585.11e-142probable transcription factor PosF21
RefseqXP_027119586.11e-142probable transcription factor PosF21
RefseqXP_027165295.11e-142probable transcription factor PosF21
RefseqXP_027165296.11e-142probable transcription factor PosF21
RefseqXP_027165298.11e-142probable transcription factor PosF21
SwissprotQ040881e-116POF21_ARATH; Probable transcription factor PosF21
TrEMBLA0A068VB621e-140A0A068VB62_COFCA; Uncharacterized protein
STRINGXP_006478733.11e-140(Citrus sinensis)
STRINGXP_006442989.11e-140(Citrus clementina)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06070.11e-115bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Xu C, et al.
    Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration.
    Nat Plants, 2018. 4(2): p. 108-115
    [PMID:29358751]