PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0040s0065.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 211aa    MW: 23599.5 Da    PI: 9.3079
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0040s0065.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.33.7e-0539791155
                         HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                          RR++i +++  L++++P +    +k   Ka +L + ++Y++ Lq
  Kaladp0040s0065.1.p 39 VRREKIGQRMRILQDVVPGC----NKITGKAGMLDEIINYVQVLQ 79
                         6*******************....999**************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.0422878IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.11E-113894IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.08E-54083No hitNo description
Gene3DG3DSA:4.10.280.102.9E-114191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MGARNHDRRQ ANFQSDFNTR HLQRQRRLFQ AANCFCVQVR REKIGQRMRI LQDVVPGCNK  60
ITGKAGMLDE IINYVQVLQR QVEFLSMKLA TVTIAHDFNN IINIPSAVHT GVAVTDAISH  120
AHLFFNQSYA SNITETGQNS FDTARGSTMS TPTSVHKYFL DAAGFTPPLT WNPDFQAVPG  180
QTFHQSRSGT FSSHPPEADT TSMSNQFTMF *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018818185.19e-40PREDICTED: transcription factor bHLH63-like
RefseqXP_018857591.19e-40PREDICTED: transcription factor bHLH63-like
RefseqXP_018858813.19e-40PREDICTED: transcription factor bHLH63-like
TrEMBLA0A2I4EFM12e-38A0A2I4EFM1_JUGRE; transcription factor bHLH63-like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.23e-29bHLH family protein