PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0042s0123.1.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bZIP

Protein Properties

Length: 425aa MW: 44328.7 Da PI: 9.9524

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0042s0123.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	48	2.6e-15	345	396	5	56
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++L+k+ e+ ++ Kaladp0042s0123.1.p 345 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENQELQKKQAEIMEMQ 396 79****************************************9998888875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	5.1E-14	341	407	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.358	343	394	IPR004827	Basic-leucine zipper domain
CDD	cd14707	3.22E-26	345	399	No hit	No description
Pfam	PF00170	2.8E-13	345	397	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.44E-11	345	394	No hit	No description
Gene3D	G3DSA:1.20.5.170	6.9E-15	345	394	No hit	No description
PROSITE pattern	PS00036	0	348	363	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009414	Biological Process	response to water deprivation
GO:0009651	Biological Process	response to salt stress
GO:0009738	Biological Process	abscisic acid-activated signaling pathway
GO:0010255	Biological Process	glucose mediated signaling pathway
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0000976	Molecular Function	transcription regulatory region sequence-specific DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence Send to blast
MGTNLNFNHF GGEAAAAGGG RQVGNSPLTR QTSIYALTFD ELQNTMGGSI GKDFGSMNMD 60 ELLKNIWTAE ESQTMAAAAA AAGGGAIGGG VGSSGGCNLQ RQGSLTLPRT LSQKTVDEIW 120 KDMSKDGGGG GAGGGASGAG FAQRQPTLGE ITLEEFLVRA GVVREDANIA QNLASNGTTN 180 GVGGFYGDLI RNNNGRGVTS DALGGFGFQQ AGLVNSCSQM MMQPANLPLN INGVRSSDQQ 240 PQKHTHQQPL FPKQPALSYA NPLGGSPRLR GGLVGLADPG LIQGGGLGMT GLGVTVATGS 300 PAQLSSDGLG RSNGDTSSLS PVPYAFSAGI RGRRVNGAVE KVVERRQRRM IKNRESAARS 360 RARKQAYTME LEAEVAKLKE ENQELQKKQA EIMEMQKNQV LEMMNNQGGG GKRQCLRRTQ 420 TGPW*

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence Send to blast

MGTNLNFNHF GGEAAAAGGG RQVGNSPLTR QTSIYALTFD ELQNTMGGSI GKDFGSMNMD  60
ELLKNIWTAE ESQTMAAAAA AAGGGAIGGG VGSSGGCNLQ RQGSLTLPRT LSQKTVDEIW  120
KDMSKDGGGG GAGGGASGAG FAQRQPTLGE ITLEEFLVRA GVVREDANIA QNLASNGTTN  180
GVGGFYGDLI RNNNGRGVTS DALGGFGFQQ AGLVNSCSQM MMQPANLPLN INGVRSSDQQ  240
PQKHTHQQPL FPKQPALSYA NPLGGSPRLR GGLVGLADPG LIQGGGLGMT GLGVTVATGS  300
PAQLSSDGLG RSNGDTSSLS PVPYAFSAGI RGRRVNGAVE KVVERRQRRM IKNRESAARS  360
RARKQAYTME LEAEVAKLKE ENQELQKKQA EIMEMQKNQV LEMMNNQGGG GKRQCLRRTQ  420
TGPW*

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00186	DAP	Transfer from AT1G45249	Download

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002302435.1	1e-160	bZIP transcription factor TRAB1
Refseq	XP_027091459.1	1e-160	bZIP transcription factor 46-like
Refseq	XP_027091460.1	1e-160	bZIP transcription factor 46-like
Swissprot	Q9M7Q4	1e-122	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	B9GNV5	1e-159	B9GNV5_POPTR; Uncharacterized protein
STRING	POPTR_0002s12710.1	1e-159	(Populus trichocarpa)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	1e-88	abscisic acid responsive elements-binding factor 2

Link Out ? help Back to Top
Phytozome	Kaladp0042s0123.1.p

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]