PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0043s0012.2.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 223aa    MW: 24453.5 Da    PI: 8.2533
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0043s0012.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.12.2e-14172217348
                          XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                          + kr+rr++kNRe+A rsR+RK++ + +Le  + +Le+eN+ L ke
  Kaladp0043s0012.2.p 172 AQKRQRRMIKNRESAARSRERKQEHQVKLESLASKLEEENDHLMKE 217
                          78***************************************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.4E-13165217No hitNo description
SMARTSM003381.5E-4170221IPR004827Basic-leucine zipper domain
PfamPF001701.3E-12171217IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.887172222IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.73E-10174218No hitNo description
CDDcd147071.16E-15174222No hitNo description
PROSITE patternPS000360177192IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MASLTNMMTA SSTTTINSDL PRRTASSDHN TKSANESDDV PEDTTSRQAS RRRTVEDVWK  60
GIVAGEKKVC KVEVPDDMMT LEDFLVRAGA VDREEVVDDH VKVRVPLSAS VSAGLGTMTS  120
RLLSFDSINL SPFPSGGGSS IYGSGIAFTD SGGLGRRNMR GSCVFEPLDK AAQKRQRRMI  180
KNRESAARSR ERKQEHQVKL ESLASKLEEE NDHLMKEKVL LH*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027366272.14e-52G-box-binding factor 4-like
RefseqXP_027366273.14e-52G-box-binding factor 4-like
TrEMBLA0A4D6N2S41e-47A0A4D6N2S4_VIGUN; ABA responsive element binding factor
STRINGXP_007143550.13e-46(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03970.15e-27G-box binding factor 4