PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0043s0059.1.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bZIP

Protein Properties

Length: 331aa MW: 36601.6 Da PI: 6.4185

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0043s0059.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	26	2e-08	2	46	17	61
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 A r+R++ ++e +L+ + k+++aeN++L +e+e+l+k+v+ l Kaladp0043s0059.1.p 2 ACRCREKQRKESSRLQAENKKFTAENRMLVEENERLQKQVSHLSY 46 669*************************************98865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	9.3E-6	2	44	No hit	No description
CDD	cd14686	7.57E-7	2	42	No hit	No description
PROSITE profile	PS50848	18.87	86	305	IPR002913	START domain
SMART	SM00234	3.9E-32	95	305	IPR002913	START domain
Gene3D	G3DSA:3.30.530.20	2.1E-13	95	276	IPR023393	START-like domain
SuperFamily	SSF55961	1.24E-25	96	307	No hit	No description
Pfam	PF01852	1.7E-40	96	303	IPR002913	START domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0008289	Molecular Function	lipid binding

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence Send to blast
MACRCREKQR KESSRLQAEN KKFTAENRML VEENERLQKQ VSHLSYDNGF MRQILRSRSA 60 TTDANCESVV TPHSQQNPTH QLRERDANSP AGFLAIAEET QAEFLSKATG TAVHWVHMVG 120 MKPGPDYVGI VAVSRNCEGV TARACGLVSL EPMKVAEILK DTLAWFRDCR THEVLSVLPT 180 ANGGTIEFIY MQTYAPTTMA SACDFWKLRF ISPREDGGPV VCERSLNAST GGPTGPSSLN 240 FVRAEVFPSG FLIRPCEGGG SIIHIAEHLD LDPCSAPEIL RPLYESSKII AQKITFAALR 300 HIRQIAQEKC GELNMEEENS LLFLELSAND *

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor. {ECO:0000250}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010247499.1	1e-160	PREDICTED: homeobox-leucine zipper protein HOX32-like
Refseq	XP_021298191.1	1e-160	homeobox-leucine zipper protein ATHB-14-like isoform X1
Swissprot	Q6AST1	1e-156	HOX32_ORYSJ; Homeobox-leucine zipper protein HOX32
TrEMBL	A0A061G8K4	1e-160	A0A061G8K4_THECC; Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein isoform 6
TrEMBL	A0A2N9J8X2	1e-160	A0A2N9J8X2_FAGSY; Uncharacterized protein
STRING	XP_010247498.1	1e-159	(Nelumbo nucifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30490.1	1e-151	HD-ZIP family protein

Link Out ? help Back to Top
Phytozome	Kaladp0043s0059.1.p

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Itoh J,Hibara K,Sato Y,Nagato Y Developmental role and auxin responsiveness of Class III homeodomain leucine zipper gene family members in rice. Plant Physiol., 2008. 147(4): p. 1960-75 [PMID:18567825] Li YY, et al. Overexpression of OsHox32 Results in Pleiotropic Effects on Plant Type Architecture and Leaf Development in Rice. Rice (N Y), 2016. 9(1): p. 46 [PMID:27624698]