PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0045s0494.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 642aa    MW: 69450.9 Da    PI: 6.1508
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0045s0494.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.32e-30390448259
                          --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                           Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+
  Kaladp0045s0494.1.p 390 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILVTTYEGNHNHP 448
                          7***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.6E-33374450IPR003657WRKY domain
SuperFamilySSF1182901.7E-27382450IPR003657WRKY domain
PROSITE profilePS5081129.7384450IPR003657WRKY domain
SMARTSM007741.7E-36389449IPR003657WRKY domain
PfamPF031062.5E-26391448IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 642 aa     Download sequence    Send to blast
MATKAGFSSS GLSIDSDPFS SSSSPPIQHH LFFHPPPPPP PPHIHYMEST TTATSAQSKA  60
SWSNPSPTIQ FPLNLNYTSP DEHQPQDDDH GDIKFIHDDL RLSSDNEDHP HNRVINEMDF  120
FAVADHNKKK LIMNEEGGSS KLAAPTDFDP QNATTKDPLH GSTQDFNNVY TGLHLLTANT  180
SSTDQSVVDD GSSPASDDAR AKNEIVMLQA EIERMNKENQ RLKDMLSHVS NNYSAMQVHL  240
MKLGDSQKKD ARDQQQLQMI AQEHQKEDQQ QMLGGSPQLV VQKQLMDLGL APASDIHDQQ  300
SLSSSENHED GRSNSSPTNL EAASKLQVEE AREQIRMGMG REGEAAHGLP NKVPKFNPSK  360
SNADQASSTE ATMRKARVSV RARSEAPMIT DGCQWRKYGQ KMAKGNPCPR AYYRCTMAAG  420
CPVRKQVQRC AEDRTILVTT YEGNHNHPLP PAAMAMASTT SSAARMLLSG SMSSADGLMN  480
PNFLARTLLP CSSNMATISA SAPFPTVTLD LTLNPNATQP LPNTLTQIQS QFQNPSQNLP  540
LLPQILTQAL YSHSKFSGLH MSQNDMDSSS LAPKQQGSLA DSLTAASAAI AADPNFTAVI  600
AAAISSFIGN SHPSNNVTNN STNSNTDSGA NIVNSSSFPE N*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-21376452176WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023921697.10.0probable WRKY transcription factor 31
SwissprotQ9XEC31e-128WRK42_ARATH; WRKY transcription factor 42
TrEMBLA0A438IL690.0A0A438IL69_VITVI; WRKY transcription factor 6
STRINGVIT_12s0059g00880.t010.0(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-111WRKY family protein