PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0048s0308.2.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Trihelix
Protein Properties Length: 305aa    MW: 33039.3 Da    PI: 10.2104
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0048s0308.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix544.5e-1727109186
             trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                          +W ++ v  L+ea++ ++   +r+klk+++W+ev++++ +     ++++qCk+k+e+++kry+  ++   +    s st+p++++++
  Kaladp0048s0308.2.p  27 EWGERAVASLLEAYEAKWVLRNRAKLKGHDWQEVARFVsATADAPKTQTQCKNKIESMKKRYRSAAAATAG----SASTWPFYQRIH 109
                          5*************************************5555679*******************9999997....4779*****997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138376.4E-2025110No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MEKATANHEL PPKPPPCGGG DKLKRDEWGE RAVASLLEAY EAKWVLRNRA KLKGHDWQEV  60
ARFVSATADA PKTQTQCKNK IESMKKRYRS AAAATAGSAS TWPFYQRIHN LLRGDNNNTG  120
GGGSSRAAPQ ISSSPLEAPS PPPFPATAQE SNGLVFKAVE EAEDDAGAKL LLSQPDGAHD  180
KALTHPNSTD SASTTPAFYR DGGKLIRPSS SNARRKRKSG VLVAESVRWL AEAVVRTEKA  240
RMETMRELEK MRIEAEMKRG ELELKRTRII ADTQLQIARL LSGSCVLVPK TADGSPPSFQ  300
PGTS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027342812.13e-80trihelix transcription factor ASIL1-like
TrEMBLA0A371E9U64e-76A0A371E9U6_MUCPR; Trihelix transcription factor ASIL2 (Fragment)
STRINGGLYMA13G26550.14e-75(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54390.19e-59sequence-specific DNA binding transcription factors