PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0048s0326.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NAC
Protein Properties Length: 239aa    MW: 26293.7 Da    PI: 9.7082
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0048s0326.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM47.36.9e-1591493128
                  NAM   3 pGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgk 88 
                          pG  F+P +ee+  +yLk  + g +    +e+++++vd+y    Pw+  ++ + ++ +  fF+ ++  ++++ r +r +   g+Wk +  
  Kaladp0048s0326.1.p   9 PGRVFNPAEEEIAGFYLKLAAMGMPlpPFAESAVRRVDVYGNqAPWEVFAE-ELGRGSRVFFAITRLVKRSKGRMSRvVGGGGTWKGQSV 97 
                          8999********************964223356******97648****732.2344456777777777778889999566699******* PP

                  NAM  89 dkevlskkgelvglkktLvfy..............kgrapkgektdWvmheyrl 128
                          ++e++   g ++ ++ +L f               +++++k  +t+W m ey++
  Kaladp0048s0326.1.p  98 KREIKI--GDVTAVRYSLSFMketndeqaaaspekTKKKKKMASTHWNMVEYKV 149
                          ****99..8899*********77777666666654367888889********86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.97E-164170IPR003441NAC domain
PROSITE profilePS5100519.7587170IPR003441NAC domain
PfamPF023657.5E-99148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    Send to blast
MLMAEEWCPG RVFNPAEEEI AGFYLKLAAM GMPLPPFAES AVRRVDVYGN QAPWEVFAEE  60
LGRGSRVFFA ITRLVKRSKG RMSRVVGGGG TWKGQSVKRE IKIGDVTAVR YSLSFMKETN  120
DEQAAASPEK TKKKKKMAST HWNMVEYKVL SYSGEGDLDQ NVVFCRLTYS GPQHQSSPVP  180
SLASSSAVGG SKRGRREGDE SISSRPCKRV TQEQQQDDGG VTTYSALNHQ AGESSRRE*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10480.24e-10NAC domain containing protein 50