PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0048s0366.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family DBB
Protein Properties Length: 268aa    MW: 29829.1 Da    PI: 4.0516
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0048s0366.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box23.41.2e-07434535
             zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHk 35
                         kC+ +++++   +C++++ +lC dC ++ H 
  Kaladp0048s0366.1.p  4 KCDFCGNQRSVVYCRSDDACLCLDCDTSVHT 34
                         7***************************994 PP
2zf-B_box24.84.4e-084789541
             zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg.......Htvvp 41
                         +C++++++++ l C + ++ lC++C  ++H g       H++++
  Kaladp0048s0366.1.p 47 VCQRCNSQPAVLQCIEERVSLCQSCDWAGH-GastsaaaHKRRN 89
                         8*****************************.5588888898765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501199.186147IPR000315B-box-type zinc finger
SMARTSM003361.8E-9447IPR000315B-box-type zinc finger
PfamPF006433.8E-5434IPR000315B-box-type zinc finger
CDDcd000211.25E-8435No hitNo description
PROSITE profilePS501198.8024390IPR000315B-box-type zinc finger
CDDcd000215.27E-44776No hitNo description
SMARTSM003360.534890IPR000315B-box-type zinc finger
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MGYKCDFCGN QRSVVYCRSD DACLCLDCDT SVHTANSLSR RHWRTLVCQR CNSQPAVLQC  60
IEERVSLCQS CDWAGHGAST SAAAHKRRNI KFYSDCPSAA ELQAIWSFEL EGFLGSVSIG  120
EQEMGLLSIT EKNVKQSEPL STEVNQLCNI NPDEVWNSSA QDMDSLFPDE RLETEVANSP  180
QPMVSFSGAI NPTEDDDLFA NFGMDESELN LENYEELFRV NLSQSEELLE NGGIDSLFEP  240
TNKSLSELDC RETLVSQVYF SPLLVLQ*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006447848.12e-85zinc finger protein CONSTANS-LIKE 9
RefseqXP_006469416.12e-85zinc finger protein CONSTANS-LIKE 9
RefseqXP_015382901.12e-85zinc finger protein CONSTANS-LIKE 9
RefseqXP_024951289.12e-85zinc finger protein CONSTANS-LIKE 9
SwissprotQ9SSE53e-69COL9_ARATH; Zinc finger protein CONSTANS-LIKE 9
TrEMBLA0A067EIF25e-85A0A067EIF2_CITSI; Uncharacterized protein
TrEMBLA0A2P5ER891e-84A0A2P5ER89_TREOI; Zinc finger-domain containing protein
STRINGXP_006469416.17e-85(Citrus sinensis)
STRINGXP_006447847.17e-85(Citrus clementina)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07650.45e-58CONSTANS-like 9