PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0050s0021.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 417aa    MW: 45522 Da    PI: 6.7075
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0050s0021.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_152.11.5e-16207266362
                          XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                          + kr rr+ +NRe+ArrsR+RK+a +  Le+ v++L  eN++L ++l+ ++++ +++  +
  Kaladp0050s0021.1.p 207 DAKRVRRMLSNRESARRSRRRKQAHLTDLETQVAQLRVENSSLTNRLNDISQKFDEVSVD 266
                          689*****************************************9999999988776655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.4E-13203261No hitNo description
SMARTSM003384.8E-18205269IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.691207270IPR004827Basic-leucine zipper domain
PfamPF001709.3E-14208261IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.47E-12209258No hitNo description
CDDcd147022.79E-6210261No hitNo description
PROSITE patternPS000360212227IPR004827Basic-leucine zipper domain
PfamPF124981.2E-35276406IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 417 aa     Download sequence    Send to blast
MDRVFSVEGI ADHFWTSPPP SQLVNHSNAD ASPSNTTMNR SSSEWAFQLF IQENTHSPAA  60
TKLHDDQDVV EIKDHPAAPP NVPIDSDEYQ AFLKTRLDLA CAAVAMTRQA STGKPQDSST  120
STDSGTKALN ASQVRSHVNK KVCVGSGSDS SKRKNKDGPL GNPTLPAKPS KHVVQVKSTT  180
SGSSRELSDD DELEGVTEMT GDMDHTDAKR VRRMLSNRES ARRSRRRKQA HLTDLETQVA  240
QLRVENSSLT NRLNDISQKF DEVSVDNRVL KADVETLRAK VKMAEETVKR VTGQSPMFQT  300
MSETSTFNTQ SYDGDNSDIS TDAAVPIQDD RSDHIYQQHA SNPLTATPLH DPRVTNSLSN  360
NSSTENACPN SSAAETITLS GNKTGRMSSM QRVASLEHLQ KRIRGNSSAT QCNGEQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1221228RRSRRRKQ
2223228SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001312947.11e-139light-inducible protein CPRF2-like
SwissprotQ990901e-116CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLA0A1S4CER81e-139A0A1S4CER8_TOBAC; light-inducible protein CPRF2-like
STRINGXP_009787496.11e-138(Nicotiana sylvestris)
STRINGPGSC0003DMT4000500961e-138(Solanum tuberosum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.21e-68bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]