PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0050s0021.2.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 416aa    MW: 45393.9 Da    PI: 6.7075
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0050s0021.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1521.5e-16206265362
                          XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                          + kr rr+ +NRe+ArrsR+RK+a +  Le+ v++L  eN++L ++l+ ++++ +++  +
  Kaladp0050s0021.2.p 206 DAKRVRRMLSNRESARRSRRRKQAHLTDLETQVAQLRVENSSLTNRLNDISQKFDEVSVD 265
                          689*****************************************9999999988776655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.4E-13202260No hitNo description
SMARTSM003384.8E-18204268IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.691206269IPR004827Basic-leucine zipper domain
PfamPF001709.3E-14207260IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.3E-12208257No hitNo description
CDDcd147022.65E-6209260No hitNo description
PROSITE patternPS000360211226IPR004827Basic-leucine zipper domain
PfamPF124981.2E-35275405IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    Send to blast
MDRVFSVEGI ADHFWTSPPP SQLVNHSNAD ASPSNTTMNR SSSEWAFQLF IQENTHSPAA  60
TKLHDDQDVV EIKDHPAAPP NVPIDSDEYQ AFLKTRLDLA CAAVAMTRAS TGKPQDSSTS  120
TDSGTKALNA SQVRSHVNKK VCVGSGSDSS KRKNKDGPLG NPTLPAKPSK HVVQVKSTTS  180
GSSRELSDDD ELEGVTEMTG DMDHTDAKRV RRMLSNRESA RRSRRRKQAH LTDLETQVAQ  240
LRVENSSLTN RLNDISQKFD EVSVDNRVLK ADVETLRAKV KMAEETVKRV TGQSPMFQTM  300
SETSTFNTQS YDGDNSDIST DAAVPIQDDR SDHIYQQHAS NPLTATPLHD PRVTNSLSNN  360
SSTENACPNS SAAETITLSG NKTGRMSSMQ RVASLEHLQK RIRGNSSATQ CNGEQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1220227RRSRRRKQ
2222227SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001312947.11e-140light-inducible protein CPRF2-like
RefseqXP_006347748.11e-140PREDICTED: light-inducible protein CPRF2
SwissprotQ990901e-118CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLA0A1S4CER81e-140A0A1S4CER8_TOBAC; light-inducible protein CPRF2-like
STRINGPGSC0003DMT4000500961e-140(Solanum tuberosum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.22e-70bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]