PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0053s0089.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family BES1
Protein Properties Length: 114aa    MW: 12835.5 Da    PI: 9.5246
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0053s0089.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822204.33.6e-6331142121
               DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspe 91 
                          +++r ptw+ErEnnkrRERrRRaiaakiyaGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp e+++++g+sas+sp+
  Kaladp0053s0089.1.p   3 TGTRLPTWRERENNKRRERRRRAIAAKIYAGLRMYGNYKLPKHCDNNEVLKALCNEAGWIVEEDGTTYRKGCKPSERMDVIGCSASVSPC 92 
                          789*************************************************************************************** PP

               DUF822  92 sslqsslkssalaspvesysaspksssfps 121
                          ss+q        +sp++sy++sp sssfps
  Kaladp0053s0089.1.p  93 SSYQ--------PSPCASYNPSPPSSSFPS 114
                          ****........9**************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056877.9E-624114IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    Send to blast
MTTGTRLPTW RERENNKRRE RRRRAIAAKI YAGLRMYGNY KLPKHCDNNE VLKALCNEAG  60
WIVEEDGTTY RKGCKPSERM DVIGCSASVS PCSSYQPSPC ASYNPSPPSS SFPS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A1e-26676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B1e-26676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C1e-26676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D1e-26676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009352718.16e-60PREDICTED: BES1/BZR1 homolog protein 4-like
SwissprotQ9ZV881e-48BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A1D1YRS85e-53A0A1D1YRS8_9ARAE; BES1/BZR1 4 (Fragment)
TrEMBLA0A2P6Q4Z35e-53A0A2P6Q4Z3_ROSCH; Putative transcription factor BES/BZR family
STRINGXP_009352718.12e-59(Pyrus x bretschneideri)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18890.17e-40BES1/BZR1 homolog 3