PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0055s0047.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GeBP
Protein Properties Length: 409aa    MW: 45094.6 Da    PI: 6.2309
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0055s0047.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573119.61.6e-37171266297
               DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifel 91 
                          lfqrl+se+Dei++L+G+++f ak+g +p dd+++f++fvk+si+++v++ qlv+Ki+rLKkK++++++++k+g +++fsk+h+q +++l
  Kaladp0055s0047.1.p 171 LFQRLFSEDDEIAVLKGMLEFSAKKGIDPIDDVNGFHDFVKDSIHVDVTSAQLVDKIKRLKKKYENNMRRSKTGVDKTFSKPHEQISYDL 260
                          79**************************************************************************************** PP

               DUF573  92 skkiWg 97 
                          skkiWg
  Kaladp0055s0047.1.p 261 SKKIWG 266
                          *****8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045049.4E-33172266IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 409 aa     Download sequence    Send to blast
MAPKKPTPFE QPPRADSSSD DEEEEQESDD SEEEDEQQQP KVVPPAAEKK PVLSKKPEPK  60
PHSSSDEDGS VSGSDSETTL PAADPTINPV PSKPAEDSPK VSSKSKLKKP DAPPPAVSVA  120
GKRPGESKGD VKNTKKSKKV ADVEDRQVME AKKAATEEEV KKVGEDSKKQ LFQRLFSEDD  180
EIAVLKGMLE FSAKKGIDPI DDVNGFHDFV KDSIHVDVTS AQLVDKIKRL KKKYENNMRR  240
SKTGVDKTFS KPHEQISYDL SKKIWGFENA KATSASNGGG GGFELKANGK GKRTPKPNMT  300
PDQKEKHASS LQIPKDIWAK NEHEHARSSC ASSLRLTEIM RSKDTVGTGL SEEFFKRGLE  360
LLGDDVKARL EDRWESLLLA EGELYCQRLE LIRDQVKLML DAYKTSGL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25210.13e-28DNA-binding storekeeper protein-related transcriptional regulator