PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0056s0062.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 326aa    MW: 35635.5 Da    PI: 5.3818
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0056s0062.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1491.3e-15147199456
                          XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                           +r rr+++NRe+ArrsR+RK+a+++ Le  v++L +eN +L k+l++  ++ 
  Kaladp0056s0062.1.p 147 FRRMRRMESNRESARRSRKRKQAQLQDLESQVDQLRGENASLFKQLSSAAQQF 199
                          5799**************************************98877766654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.1E-16144208IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.565146200IPR004827Basic-leucine zipper domain
PfamPF001702.7E-13147198IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.13E-12148198No hitNo description
Gene3DG3DSA:1.20.5.1709.5E-13148200No hitNo description
CDDcd147021.18E-20149199No hitNo description
PROSITE patternPS000360151166IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MKRSASELAF DEFLWPDITA PPTPAEDQRI RASDPPRHHQ LDDCFFLNAD FPADFTFDVR  60
AREILSGLSS ACGFPENLLW SADIAPNQSN LTTTTTTTAT TIDSQSSICA GSPLSENKPK  120
DNPARAVASG SDQSDYDDVE QNNPTDFRRM RRMESNRESA RRSRKRKQAQ LQDLESQVDQ  180
LRGENASLFK QLSSAAQQFK DAATNNRVLK SDVEALRAHV KLADEMVARG SLTSSLNHLL  240
QTHLSLPLAM SSHGLNRLAN VSPTMTIPGE EASFTGNISA AGQTATSLGQ QHSLDHANNR  300
IIDDVLSCVT DVWPPLEPHV PVVSK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1160166RRSRKRK
2160167RRSRKRKQ
3162167SRKRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002283059.25e-85PREDICTED: basic leucine zipper 9
TrEMBLA0A438C2301e-83A0A438C230_VITVI; Basic leucine zipper 9
TrEMBLF6H3C41e-83F6H3C4_VITVI; Uncharacterized protein
STRINGVIT_04s0008g02750.t012e-84(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.13e-49basic leucine zipper 9